Gene : Eucgr.F02214 E. grandis v2.0
Defline:  (1 of 5) 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  1973
Name:  ? Eucgr.F02214 Secondary Identifier:  ? PAC:32057427
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2541 Eucalyptus grandis pathologic  
Egrandis PWY-5670 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02214 0.5kb upstream 0.5kb upstream 3686 true Chr06: 33239912-33243597 Eucalyptus grandis
Eucgr.F02214 0.5kb upstream 0.5kb upstream 500 false Chr06: 33239912-33240411 Eucalyptus grandis
Eucgr.F02214 0.5kb downstream 0.5kb downstream 3686 true Chr06: 33240412-33244097 Eucalyptus grandis
Eucgr.F02214 0.5kb downstream 0.5kb downstream 500 false Chr06: 33243598-33244097 Eucalyptus grandis
Eucgr.F02214 1.0kb upstream 1.0kb upstream 4186 true Chr06: 33239412-33243597 Eucalyptus grandis
Eucgr.F02214 1.0kb upstream 1.0kb upstream 1000 false Chr06: 33239412-33240411 Eucalyptus grandis
Eucgr.F02214 1.0kb downstream 1.0kb downstream 4186 true Chr06: 33240412-33244597 Eucalyptus grandis
Eucgr.F02214 1.0kb downstream 1.0kb downstream 1000 false Chr06: 33243598-33244597 Eucalyptus grandis
Eucgr.F02214 2.0kb upstream 2.0kb upstream 5186 true Chr06: 33238412-33243597 Eucalyptus grandis
Eucgr.F02214 2.0kb upstream 2.0kb upstream 2000 false Chr06: 33238412-33240411 Eucalyptus grandis
Eucgr.F02214 2.0kb downstream 2.0kb downstream 5186 true Chr06: 33240412-33245597 Eucalyptus grandis
Eucgr.F02214 2.0kb downstream 2.0kb downstream 2000 false Chr06: 33243598-33245597 Eucalyptus grandis
Eucgr.F02214 5.0kb upstream 5.0kb upstream 8186 true Chr06: 33235412-33243597 Eucalyptus grandis
Eucgr.F02214 5.0kb upstream 5.0kb upstream 5000 false Chr06: 33235412-33240411 Eucalyptus grandis
Eucgr.F02214 5.0kb downstream 5.0kb downstream 8186 true Chr06: 33240412-33248597 Eucalyptus grandis
Eucgr.F02214 5.0kb downstream 5.0kb downstream 5000 false Chr06: 33243598-33248597 Eucalyptus grandis
Eucgr.F02214 10.0kb upstream 10.0kb upstream 13186 true Chr06: 33230412-33243597 Eucalyptus grandis
Eucgr.F02214 10.0kb upstream 10.0kb upstream 10000 false Chr06: 33230412-33240411 Eucalyptus grandis
Eucgr.F02214 10.0kb downstream 10.0kb downstream 13186 true Chr06: 33240412-33253597 Eucalyptus grandis
Eucgr.F02214 10.0kb downstream 10.0kb downstream 10000 false Chr06: 33243598-33253597 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691835 5273 Angiosperm View MSA
124052014 5270 Rosid View MSA
123647887 5271 Pentapetalae View MSA
122681831 5272 Eudicot View MSA
120963671 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.131445 0.0 0.493059 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain