Gene : Eucgr.F02179 E. grandis v2.0
Defline:  (1 of 1) PTHR11206:SF92 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  2005
Name:  ? Eucgr.F02179 Secondary Identifier:  ? PAC:32054405
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02179 0.5kb upstream 0.5kb upstream 2308 true Chr06: 33724962-33727269 Eucalyptus grandis
Eucgr.F02179 0.5kb upstream 0.5kb upstream 500 false Chr06: 33724962-33725461 Eucalyptus grandis
Eucgr.F02179 0.5kb downstream 0.5kb downstream 2308 true Chr06: 33725462-33727769 Eucalyptus grandis
Eucgr.F02179 0.5kb downstream 0.5kb downstream 500 false Chr06: 33727270-33727769 Eucalyptus grandis
Eucgr.F02179 1.0kb upstream 1.0kb upstream 2808 true Chr06: 33724462-33727269 Eucalyptus grandis
Eucgr.F02179 1.0kb upstream 1.0kb upstream 1000 false Chr06: 33724462-33725461 Eucalyptus grandis
Eucgr.F02179 1.0kb downstream 1.0kb downstream 2808 true Chr06: 33725462-33728269 Eucalyptus grandis
Eucgr.F02179 1.0kb downstream 1.0kb downstream 1000 false Chr06: 33727270-33728269 Eucalyptus grandis
Eucgr.F02179 2.0kb upstream 2.0kb upstream 3808 true Chr06: 33723462-33727269 Eucalyptus grandis
Eucgr.F02179 2.0kb upstream 2.0kb upstream 2000 false Chr06: 33723462-33725461 Eucalyptus grandis
Eucgr.F02179 2.0kb downstream 2.0kb downstream 3808 true Chr06: 33725462-33729269 Eucalyptus grandis
Eucgr.F02179 2.0kb downstream 2.0kb downstream 2000 false Chr06: 33727270-33729269 Eucalyptus grandis
Eucgr.F02179 5.0kb upstream 5.0kb upstream 6808 true Chr06: 33720462-33727269 Eucalyptus grandis
Eucgr.F02179 5.0kb upstream 5.0kb upstream 5000 false Chr06: 33720462-33725461 Eucalyptus grandis
Eucgr.F02179 5.0kb downstream 5.0kb downstream 6808 true Chr06: 33725462-33732269 Eucalyptus grandis
Eucgr.F02179 5.0kb downstream 5.0kb downstream 5000 false Chr06: 33727270-33732269 Eucalyptus grandis
Eucgr.F02179 10.0kb upstream 10.0kb upstream 11808 true Chr06: 33715462-33727269 Eucalyptus grandis
Eucgr.F02179 10.0kb upstream 10.0kb upstream 10000 false Chr06: 33715462-33725461 Eucalyptus grandis
Eucgr.F02179 10.0kb downstream 10.0kb downstream 11808 true Chr06: 33725462-33737269 Eucalyptus grandis
Eucgr.F02179 10.0kb downstream 10.0kb downstream 10000 false Chr06: 33727270-33737269 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064495 5270 Rosid View MSA
123738593 5271 Pentapetalae View MSA
122792210 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.404313 0.0 1.381    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.407411 0.0 1.37923 Low  
cufflinks 7.6622 0.0 18.5868   High

0 Strain