Gene : Eucgr.F02158 E. grandis v2.0
Defline:  (1 of 1) KOG3117 - Protein involved in rRNA processing Genomic Order:  2026
Name:  ? Eucgr.F02158 Secondary Identifier:  ? PAC:32054913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02158 0.5kb upstream 0.5kb upstream 4248 true Chr06: 34021912-34026159 Eucalyptus grandis
Eucgr.F02158 0.5kb upstream 0.5kb upstream 500 false Chr06: 34025660-34026159 Eucalyptus grandis
Eucgr.F02158 0.5kb downstream 0.5kb downstream 4248 true Chr06: 34021412-34025659 Eucalyptus grandis
Eucgr.F02158 0.5kb downstream 0.5kb downstream 500 false Chr06: 34021412-34021911 Eucalyptus grandis
Eucgr.F02158 1.0kb upstream 1.0kb upstream 4748 true Chr06: 34021912-34026659 Eucalyptus grandis
Eucgr.F02158 1.0kb upstream 1.0kb upstream 1000 false Chr06: 34025660-34026659 Eucalyptus grandis
Eucgr.F02158 1.0kb downstream 1.0kb downstream 4748 true Chr06: 34020912-34025659 Eucalyptus grandis
Eucgr.F02158 1.0kb downstream 1.0kb downstream 1000 false Chr06: 34020912-34021911 Eucalyptus grandis
Eucgr.F02158 2.0kb upstream 2.0kb upstream 5748 true Chr06: 34021912-34027659 Eucalyptus grandis
Eucgr.F02158 2.0kb upstream 2.0kb upstream 2000 false Chr06: 34025660-34027659 Eucalyptus grandis
Eucgr.F02158 2.0kb downstream 2.0kb downstream 5748 true Chr06: 34019912-34025659 Eucalyptus grandis
Eucgr.F02158 2.0kb downstream 2.0kb downstream 2000 false Chr06: 34019912-34021911 Eucalyptus grandis
Eucgr.F02158 5.0kb upstream 5.0kb upstream 8748 true Chr06: 34021912-34030659 Eucalyptus grandis
Eucgr.F02158 5.0kb upstream 5.0kb upstream 5000 false Chr06: 34025660-34030659 Eucalyptus grandis
Eucgr.F02158 5.0kb downstream 5.0kb downstream 8748 true Chr06: 34016912-34025659 Eucalyptus grandis
Eucgr.F02158 5.0kb downstream 5.0kb downstream 5000 false Chr06: 34016912-34021911 Eucalyptus grandis
Eucgr.F02158 10.0kb upstream 10.0kb upstream 13748 true Chr06: 34021912-34035659 Eucalyptus grandis
Eucgr.F02158 10.0kb upstream 10.0kb upstream 10000 false Chr06: 34025660-34035659 Eucalyptus grandis
Eucgr.F02158 10.0kb downstream 10.0kb downstream 13748 true Chr06: 34011912-34025659 Eucalyptus grandis
Eucgr.F02158 10.0kb downstream 10.0kb downstream 10000 false Chr06: 34011912-34021911 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066836 5270 Rosid View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.88968 0.0 11.8658    
cufflinks 6.22382 0.0 14.7517    
cufflinks 4.60925 0.0 11.2324    
cufflinks 2.88747 0.0 7.36181    
cufflinks 1.44531 0.0 3.9634   Low
cufflinks 7.4405 0.0 17.3858   High

0 Strain