Gene : Eucgr.F02052 E. grandis v2.0
Defline:  (1 of 1) PTHR13468:SF1 - PROTEIN DEK Genomic Order:  1694
Name:  ? Eucgr.F02052 Secondary Identifier:  ? PAC:32053623
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02052 0.5kb upstream 0.5kb upstream 7300 true Chr06: 27060790-27068089 Eucalyptus grandis
Eucgr.F02052 0.5kb upstream 0.5kb upstream 500 false Chr06: 27067590-27068089 Eucalyptus grandis
Eucgr.F02052 0.5kb downstream 0.5kb downstream 7300 true Chr06: 27060290-27067589 Eucalyptus grandis
Eucgr.F02052 0.5kb downstream 0.5kb downstream 500 false Chr06: 27060290-27060789 Eucalyptus grandis
Eucgr.F02052 1.0kb upstream 1.0kb upstream 7800 true Chr06: 27060790-27068589 Eucalyptus grandis
Eucgr.F02052 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27067590-27068589 Eucalyptus grandis
Eucgr.F02052 1.0kb downstream 1.0kb downstream 7800 true Chr06: 27059790-27067589 Eucalyptus grandis
Eucgr.F02052 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27059790-27060789 Eucalyptus grandis
Eucgr.F02052 2.0kb upstream 2.0kb upstream 8800 true Chr06: 27060790-27069589 Eucalyptus grandis
Eucgr.F02052 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27067590-27069589 Eucalyptus grandis
Eucgr.F02052 2.0kb downstream 2.0kb downstream 8800 true Chr06: 27058790-27067589 Eucalyptus grandis
Eucgr.F02052 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27058790-27060789 Eucalyptus grandis
Eucgr.F02052 5.0kb upstream 5.0kb upstream 11800 true Chr06: 27060790-27072589 Eucalyptus grandis
Eucgr.F02052 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27067590-27072589 Eucalyptus grandis
Eucgr.F02052 5.0kb downstream 5.0kb downstream 11800 true Chr06: 27055790-27067589 Eucalyptus grandis
Eucgr.F02052 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27055790-27060789 Eucalyptus grandis
Eucgr.F02052 10.0kb upstream 10.0kb upstream 16800 true Chr06: 27060790-27077589 Eucalyptus grandis
Eucgr.F02052 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27067590-27077589 Eucalyptus grandis
Eucgr.F02052 10.0kb downstream 10.0kb downstream 16800 true Chr06: 27050790-27067589 Eucalyptus grandis
Eucgr.F02052 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27050790-27060789 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.4978 0.0 217.577 High  
cufflinks 52.3081 0.0 153.512 High  
cufflinks 68.3898 0.0 219.041 High  
cufflinks 30.8996 0.0 99.0518   Low
cufflinks 55.8847 0.0 164.58 High  
cufflinks 48.7294 0.0 147.519 High  

0 Strain