Gene : Eucgr.F02046 E. grandis v2.0
Defline:  (1 of 1) PF03941 - Inner centromere protein, ARK binding region (INCENP_ARK-bind) Genomic Order:  1688
Name:  ? Eucgr.F02046 Secondary Identifier:  ? PAC:32053919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02046 0.5kb upstream 0.5kb upstream 9228 true Chr06: 26967107-26976334 Eucalyptus grandis
Eucgr.F02046 0.5kb upstream 0.5kb upstream 500 false Chr06: 26975835-26976334 Eucalyptus grandis
Eucgr.F02046 0.5kb downstream 0.5kb downstream 9228 true Chr06: 26966607-26975834 Eucalyptus grandis
Eucgr.F02046 0.5kb downstream 0.5kb downstream 500 false Chr06: 26966607-26967106 Eucalyptus grandis
Eucgr.F02046 1.0kb upstream 1.0kb upstream 9728 true Chr06: 26967107-26976834 Eucalyptus grandis
Eucgr.F02046 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26975835-26976834 Eucalyptus grandis
Eucgr.F02046 1.0kb downstream 1.0kb downstream 9728 true Chr06: 26966107-26975834 Eucalyptus grandis
Eucgr.F02046 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26966107-26967106 Eucalyptus grandis
Eucgr.F02046 2.0kb upstream 2.0kb upstream 10728 true Chr06: 26967107-26977834 Eucalyptus grandis
Eucgr.F02046 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26975835-26977834 Eucalyptus grandis
Eucgr.F02046 2.0kb downstream 2.0kb downstream 10728 true Chr06: 26965107-26975834 Eucalyptus grandis
Eucgr.F02046 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26965107-26967106 Eucalyptus grandis
Eucgr.F02046 5.0kb upstream 5.0kb upstream 13728 true Chr06: 26967107-26980834 Eucalyptus grandis
Eucgr.F02046 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26975835-26980834 Eucalyptus grandis
Eucgr.F02046 5.0kb downstream 5.0kb downstream 13728 true Chr06: 26962107-26975834 Eucalyptus grandis
Eucgr.F02046 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26962107-26967106 Eucalyptus grandis
Eucgr.F02046 10.0kb upstream 10.0kb upstream 18728 true Chr06: 26967107-26985834 Eucalyptus grandis
Eucgr.F02046 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26975835-26985834 Eucalyptus grandis
Eucgr.F02046 10.0kb downstream 10.0kb downstream 18728 true Chr06: 26957107-26975834 Eucalyptus grandis
Eucgr.F02046 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26957107-26967106 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060562 5270 Rosid View MSA
123741060 5271 Pentapetalae View MSA
122794023 5272 Eudicot View MSA
122049867 5273 Angiosperm View MSA
121311623 5274 Embryophyte View MSA
123348896 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36031 0.0 5.50637   High
cufflinks 0.521723 0.0 1.40328 Low  
cufflinks 1.23434 0.0 3.04663    
cufflinks 0.311315 0.0 0.879116 Low  
cufflinks 0.288061 0.0 0.823593 Low  
cufflinks 0.117427 0.0 0.377653 Low Low

0 Strain