Gene : Eucgr.F02068 E. grandis v2.0
Defline:  (1 of 2) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Genomic Order:  1708
Name:  ? Eucgr.F02068 Secondary Identifier:  ? PAC:32057113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02068 0.5kb upstream 0.5kb upstream 5054 true Chr06: 27290393-27295446 Eucalyptus grandis
Eucgr.F02068 0.5kb upstream 0.5kb upstream 500 false Chr06: 27290393-27290892 Eucalyptus grandis
Eucgr.F02068 0.5kb downstream 0.5kb downstream 5054 true Chr06: 27290893-27295946 Eucalyptus grandis
Eucgr.F02068 0.5kb downstream 0.5kb downstream 500 false Chr06: 27295447-27295946 Eucalyptus grandis
Eucgr.F02068 1.0kb upstream 1.0kb upstream 5554 true Chr06: 27289893-27295446 Eucalyptus grandis
Eucgr.F02068 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27289893-27290892 Eucalyptus grandis
Eucgr.F02068 1.0kb downstream 1.0kb downstream 5554 true Chr06: 27290893-27296446 Eucalyptus grandis
Eucgr.F02068 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27295447-27296446 Eucalyptus grandis
Eucgr.F02068 2.0kb upstream 2.0kb upstream 6554 true Chr06: 27288893-27295446 Eucalyptus grandis
Eucgr.F02068 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27288893-27290892 Eucalyptus grandis
Eucgr.F02068 2.0kb downstream 2.0kb downstream 6554 true Chr06: 27290893-27297446 Eucalyptus grandis
Eucgr.F02068 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27295447-27297446 Eucalyptus grandis
Eucgr.F02068 5.0kb upstream 5.0kb upstream 9554 true Chr06: 27285893-27295446 Eucalyptus grandis
Eucgr.F02068 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27285893-27290892 Eucalyptus grandis
Eucgr.F02068 5.0kb downstream 5.0kb downstream 9554 true Chr06: 27290893-27300446 Eucalyptus grandis
Eucgr.F02068 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27295447-27300446 Eucalyptus grandis
Eucgr.F02068 10.0kb upstream 10.0kb upstream 14554 true Chr06: 27280893-27295446 Eucalyptus grandis
Eucgr.F02068 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27280893-27290892 Eucalyptus grandis
Eucgr.F02068 10.0kb downstream 10.0kb downstream 14554 true Chr06: 27290893-27305446 Eucalyptus grandis
Eucgr.F02068 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27295447-27305446 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067155 5270 Rosid View MSA
123740113 5271 Pentapetalae View MSA
122785802 5272 Eudicot View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29794 0.0 7.9129    
cufflinks 2.27864 0.0 5.98737    
cufflinks 3.4122 0.0 10.0526    
cufflinks 3.81973 0.0 12.8251   High
cufflinks 1.03049 0.0 2.97477   Low
cufflinks 2.05905 0.0 5.79146    

0 Strain