Gene : Eucgr.F02040 E. grandis v2.0
Defline:  (1 of 3) KOG1692 - Putative cargo transport protein EMP24 (p24 protein family) Genomic Order:  1682
Name:  ? Eucgr.F02040 Secondary Identifier:  ? PAC:32054542
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02040 0.5kb upstream 0.5kb upstream 3667 true Chr06: 26902800-26906466 Eucalyptus grandis
Eucgr.F02040 0.5kb upstream 0.5kb upstream 500 false Chr06: 26902800-26903299 Eucalyptus grandis
Eucgr.F02040 0.5kb downstream 0.5kb downstream 3667 true Chr06: 26903300-26906966 Eucalyptus grandis
Eucgr.F02040 0.5kb downstream 0.5kb downstream 500 false Chr06: 26906467-26906966 Eucalyptus grandis
Eucgr.F02040 1.0kb upstream 1.0kb upstream 4167 true Chr06: 26902300-26906466 Eucalyptus grandis
Eucgr.F02040 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26902300-26903299 Eucalyptus grandis
Eucgr.F02040 1.0kb downstream 1.0kb downstream 4167 true Chr06: 26903300-26907466 Eucalyptus grandis
Eucgr.F02040 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26906467-26907466 Eucalyptus grandis
Eucgr.F02040 2.0kb upstream 2.0kb upstream 5167 true Chr06: 26901300-26906466 Eucalyptus grandis
Eucgr.F02040 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26901300-26903299 Eucalyptus grandis
Eucgr.F02040 2.0kb downstream 2.0kb downstream 5167 true Chr06: 26903300-26908466 Eucalyptus grandis
Eucgr.F02040 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26906467-26908466 Eucalyptus grandis
Eucgr.F02040 5.0kb upstream 5.0kb upstream 8167 true Chr06: 26898300-26906466 Eucalyptus grandis
Eucgr.F02040 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26898300-26903299 Eucalyptus grandis
Eucgr.F02040 5.0kb downstream 5.0kb downstream 8167 true Chr06: 26903300-26911466 Eucalyptus grandis
Eucgr.F02040 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26906467-26911466 Eucalyptus grandis
Eucgr.F02040 10.0kb upstream 10.0kb upstream 13167 true Chr06: 26893300-26906466 Eucalyptus grandis
Eucgr.F02040 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26893300-26903299 Eucalyptus grandis
Eucgr.F02040 10.0kb downstream 10.0kb downstream 13167 true Chr06: 26903300-26916466 Eucalyptus grandis
Eucgr.F02040 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26906467-26916466 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072381 5270 Rosid View MSA
123751948 5271 Pentapetalae View MSA
122788237 5272 Eudicot View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.0896 0.0 117.415 High  
cufflinks 62.2329 0.0 137.695 High  
cufflinks 50.1259 0.0 110.886 High  
cufflinks 92.864 0.0 207.145 High High
cufflinks 101.12 0.0 226.109 High High
cufflinks 41.1826 0.0 91.3839 High Low

0 Strain