Gene : Eucgr.F01979 E. grandis v2.0
Defline:  (1 of 1) PTHR10130 - PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 Genomic Order:  1629
Name:  ? Eucgr.F01979 Secondary Identifier:  ? PAC:32052871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01979 0.5kb upstream 0.5kb upstream 11898 true Chr06: 26114974-26126871 Eucalyptus grandis
Eucgr.F01979 0.5kb upstream 0.5kb upstream 500 false Chr06: 26126372-26126871 Eucalyptus grandis
Eucgr.F01979 0.5kb downstream 0.5kb downstream 11898 true Chr06: 26114474-26126371 Eucalyptus grandis
Eucgr.F01979 0.5kb downstream 0.5kb downstream 500 false Chr06: 26114474-26114973 Eucalyptus grandis
Eucgr.F01979 1.0kb upstream 1.0kb upstream 12398 true Chr06: 26114974-26127371 Eucalyptus grandis
Eucgr.F01979 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26126372-26127371 Eucalyptus grandis
Eucgr.F01979 1.0kb downstream 1.0kb downstream 12398 true Chr06: 26113974-26126371 Eucalyptus grandis
Eucgr.F01979 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26113974-26114973 Eucalyptus grandis
Eucgr.F01979 2.0kb upstream 2.0kb upstream 13398 true Chr06: 26114974-26128371 Eucalyptus grandis
Eucgr.F01979 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26126372-26128371 Eucalyptus grandis
Eucgr.F01979 2.0kb downstream 2.0kb downstream 13398 true Chr06: 26112974-26126371 Eucalyptus grandis
Eucgr.F01979 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26112974-26114973 Eucalyptus grandis
Eucgr.F01979 5.0kb upstream 5.0kb upstream 16398 true Chr06: 26114974-26131371 Eucalyptus grandis
Eucgr.F01979 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26126372-26131371 Eucalyptus grandis
Eucgr.F01979 5.0kb downstream 5.0kb downstream 16398 true Chr06: 26109974-26126371 Eucalyptus grandis
Eucgr.F01979 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26109974-26114973 Eucalyptus grandis
Eucgr.F01979 10.0kb upstream 10.0kb upstream 21398 true Chr06: 26114974-26136371 Eucalyptus grandis
Eucgr.F01979 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26126372-26136371 Eucalyptus grandis
Eucgr.F01979 10.0kb downstream 10.0kb downstream 21398 true Chr06: 26104974-26126371 Eucalyptus grandis
Eucgr.F01979 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26104974-26114973 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043170 5273 Angiosperm View MSA
124068433 5270 Rosid View MSA
123738284 5271 Pentapetalae View MSA
122789462 5272 Eudicot View MSA
121345209 5274 Embryophyte View MSA
123423857 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0077 0.0 50.3633    
cufflinks 21.7927 0.0 54.8306    
cufflinks 16.2443 0.0 36.5039   Low
cufflinks 17.4962 0.0 39.5299    
cufflinks 20.2889 0.0 46.1236    
cufflinks 24.4088 0.0 55.9152   High

0 Strain