Gene : Eucgr.F01970 E. grandis v2.0
Defline:  (1 of 3) PTHR10060 - TATD FAMILY DEOXYRIBONUCLEASE Genomic Order:  1621
Name:  ? Eucgr.F01970 Secondary Identifier:  ? PAC:32054517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01970 0.5kb upstream 0.5kb upstream 2673 true Chr06: 26015273-26017945 Eucalyptus grandis
Eucgr.F01970 0.5kb upstream 0.5kb upstream 500 false Chr06: 26017446-26017945 Eucalyptus grandis
Eucgr.F01970 0.5kb downstream 0.5kb downstream 2673 true Chr06: 26014773-26017445 Eucalyptus grandis
Eucgr.F01970 0.5kb downstream 0.5kb downstream 500 false Chr06: 26014773-26015272 Eucalyptus grandis
Eucgr.F01970 1.0kb upstream 1.0kb upstream 3173 true Chr06: 26015273-26018445 Eucalyptus grandis
Eucgr.F01970 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26017446-26018445 Eucalyptus grandis
Eucgr.F01970 1.0kb downstream 1.0kb downstream 3173 true Chr06: 26014273-26017445 Eucalyptus grandis
Eucgr.F01970 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26014273-26015272 Eucalyptus grandis
Eucgr.F01970 2.0kb upstream 2.0kb upstream 4173 true Chr06: 26015273-26019445 Eucalyptus grandis
Eucgr.F01970 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26017446-26019445 Eucalyptus grandis
Eucgr.F01970 2.0kb downstream 2.0kb downstream 4173 true Chr06: 26013273-26017445 Eucalyptus grandis
Eucgr.F01970 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26013273-26015272 Eucalyptus grandis
Eucgr.F01970 5.0kb upstream 5.0kb upstream 7173 true Chr06: 26015273-26022445 Eucalyptus grandis
Eucgr.F01970 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26017446-26022445 Eucalyptus grandis
Eucgr.F01970 5.0kb downstream 5.0kb downstream 7173 true Chr06: 26010273-26017445 Eucalyptus grandis
Eucgr.F01970 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26010273-26015272 Eucalyptus grandis
Eucgr.F01970 10.0kb upstream 10.0kb upstream 12173 true Chr06: 26015273-26027445 Eucalyptus grandis
Eucgr.F01970 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26017446-26027445 Eucalyptus grandis
Eucgr.F01970 10.0kb downstream 10.0kb downstream 12173 true Chr06: 26005273-26017445 Eucalyptus grandis
Eucgr.F01970 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26005273-26015272 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061063 5270 Rosid View MSA
123739501 5271 Pentapetalae View MSA
122793649 5272 Eudicot View MSA
122041796 5273 Angiosperm View MSA
121347272 5274 Embryophyte View MSA
123428718 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.93754 0.0 5.38571    
cufflinks 1.00588 0.0 2.97667   Low
cufflinks 3.21982 0.0 8.495    
cufflinks 3.43738 0.0 8.97567    
cufflinks 3.82427 0.0 9.88402   High
cufflinks 1.56131 0.0 4.48176    

0 Strain