Gene : Eucgr.F01897 E. grandis v2.0
Defline:  (1 of 1) PTHR13930 - RSAFD1-RELATED Genomic Order:  1769
Name:  ? Eucgr.F01897 Secondary Identifier:  ? PAC:32056592
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7283 Eucalyptus grandis pathologic  
Egrandis PWY-7286 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01897 0.5kb upstream 0.5kb upstream 4854 true Chr06: 29082802-29087655 Eucalyptus grandis
Eucgr.F01897 0.5kb upstream 0.5kb upstream 500 false Chr06: 29082802-29083301 Eucalyptus grandis
Eucgr.F01897 0.5kb downstream 0.5kb downstream 4854 true Chr06: 29083302-29088155 Eucalyptus grandis
Eucgr.F01897 0.5kb downstream 0.5kb downstream 500 false Chr06: 29087656-29088155 Eucalyptus grandis
Eucgr.F01897 1.0kb upstream 1.0kb upstream 5354 true Chr06: 29082302-29087655 Eucalyptus grandis
Eucgr.F01897 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29082302-29083301 Eucalyptus grandis
Eucgr.F01897 1.0kb downstream 1.0kb downstream 5354 true Chr06: 29083302-29088655 Eucalyptus grandis
Eucgr.F01897 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29087656-29088655 Eucalyptus grandis
Eucgr.F01897 2.0kb upstream 2.0kb upstream 6354 true Chr06: 29081302-29087655 Eucalyptus grandis
Eucgr.F01897 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29081302-29083301 Eucalyptus grandis
Eucgr.F01897 2.0kb downstream 2.0kb downstream 6354 true Chr06: 29083302-29089655 Eucalyptus grandis
Eucgr.F01897 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29087656-29089655 Eucalyptus grandis
Eucgr.F01897 5.0kb upstream 5.0kb upstream 9354 true Chr06: 29078302-29087655 Eucalyptus grandis
Eucgr.F01897 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29078302-29083301 Eucalyptus grandis
Eucgr.F01897 5.0kb downstream 5.0kb downstream 9354 true Chr06: 29083302-29092655 Eucalyptus grandis
Eucgr.F01897 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29087656-29092655 Eucalyptus grandis
Eucgr.F01897 10.0kb upstream 10.0kb upstream 14354 true Chr06: 29073302-29087655 Eucalyptus grandis
Eucgr.F01897 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29073302-29083301 Eucalyptus grandis
Eucgr.F01897 10.0kb downstream 10.0kb downstream 14354 true Chr06: 29083302-29097655 Eucalyptus grandis
Eucgr.F01897 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29087656-29097655 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9325 0.0 39.6889   High
cufflinks 10.7079 0.0 24.002   Low
cufflinks 16.9157 0.0 37.449    
cufflinks 13.8026 0.0 30.6453    
cufflinks 14.5491 0.0 32.3005    
cufflinks 16.1611 0.0 35.8253    

0 Strain