Gene : Eucgr.F01880 E. grandis v2.0
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  1754
Name:  ? Eucgr.F01880 Secondary Identifier:  ? PAC:32057616
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ARGSYNBSUB-PWY Eucalyptus grandis pathologic  
Egrandis ARGSYN-PWY Eucalyptus grandis pathologic  
Egrandis CITRULBIO-PWY Eucalyptus grandis pathologic  
Egrandis CITRULLINE-DEG-PWY Eucalyptus grandis pathologic  
Egrandis PWY-4984 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01880 0.5kb upstream 0.5kb upstream 4155 true Chr06: 28720854-28725008 Eucalyptus grandis
Eucgr.F01880 0.5kb upstream 0.5kb upstream 500 false Chr06: 28720854-28721353 Eucalyptus grandis
Eucgr.F01880 0.5kb downstream 0.5kb downstream 4155 true Chr06: 28721354-28725508 Eucalyptus grandis
Eucgr.F01880 0.5kb downstream 0.5kb downstream 500 false Chr06: 28725009-28725508 Eucalyptus grandis
Eucgr.F01880 1.0kb upstream 1.0kb upstream 4655 true Chr06: 28720354-28725008 Eucalyptus grandis
Eucgr.F01880 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28720354-28721353 Eucalyptus grandis
Eucgr.F01880 1.0kb downstream 1.0kb downstream 4655 true Chr06: 28721354-28726008 Eucalyptus grandis
Eucgr.F01880 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28725009-28726008 Eucalyptus grandis
Eucgr.F01880 2.0kb upstream 2.0kb upstream 5655 true Chr06: 28719354-28725008 Eucalyptus grandis
Eucgr.F01880 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28719354-28721353 Eucalyptus grandis
Eucgr.F01880 2.0kb downstream 2.0kb downstream 5655 true Chr06: 28721354-28727008 Eucalyptus grandis
Eucgr.F01880 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28725009-28727008 Eucalyptus grandis
Eucgr.F01880 5.0kb upstream 5.0kb upstream 8655 true Chr06: 28716354-28725008 Eucalyptus grandis
Eucgr.F01880 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28716354-28721353 Eucalyptus grandis
Eucgr.F01880 5.0kb downstream 5.0kb downstream 8655 true Chr06: 28721354-28730008 Eucalyptus grandis
Eucgr.F01880 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28725009-28730008 Eucalyptus grandis
Eucgr.F01880 10.0kb upstream 10.0kb upstream 13655 true Chr06: 28711354-28725008 Eucalyptus grandis
Eucgr.F01880 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28711354-28721353 Eucalyptus grandis
Eucgr.F01880 10.0kb downstream 10.0kb downstream 13655 true Chr06: 28721354-28735008 Eucalyptus grandis
Eucgr.F01880 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28725009-28735008 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1996 0.0 45.2084   High
cufflinks 6.45681 0.0 15.6752    
cufflinks 15.8336 0.0 35.8037    
cufflinks 3.92832 0.0 10.0155   Low
cufflinks 10.8968 0.0 25.3228    
cufflinks 16.8231 0.0 38.0578    

0 Strain