Gene : Eucgr.F02698 E. grandis v2.0
Defline:  (1 of 1) PTHR12197:SF160 - PROTEIN SET DOMAIN GROUP 41 Genomic Order:  2370
Name:  ? Eucgr.F02698 Secondary Identifier:  ? PAC:32057706
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02698 0.5kb upstream 0.5kb upstream 4707 true Chr06: 39072600-39077306 Eucalyptus grandis
Eucgr.F02698 0.5kb upstream 0.5kb upstream 500 false Chr06: 39076807-39077306 Eucalyptus grandis
Eucgr.F02698 0.5kb downstream 0.5kb downstream 4707 true Chr06: 39072100-39076806 Eucalyptus grandis
Eucgr.F02698 0.5kb downstream 0.5kb downstream 500 false Chr06: 39072100-39072599 Eucalyptus grandis
Eucgr.F02698 1.0kb upstream 1.0kb upstream 5207 true Chr06: 39072600-39077806 Eucalyptus grandis
Eucgr.F02698 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39076807-39077806 Eucalyptus grandis
Eucgr.F02698 1.0kb downstream 1.0kb downstream 5207 true Chr06: 39071600-39076806 Eucalyptus grandis
Eucgr.F02698 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39071600-39072599 Eucalyptus grandis
Eucgr.F02698 2.0kb upstream 2.0kb upstream 6207 true Chr06: 39072600-39078806 Eucalyptus grandis
Eucgr.F02698 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39076807-39078806 Eucalyptus grandis
Eucgr.F02698 2.0kb downstream 2.0kb downstream 6207 true Chr06: 39070600-39076806 Eucalyptus grandis
Eucgr.F02698 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39070600-39072599 Eucalyptus grandis
Eucgr.F02698 5.0kb upstream 5.0kb upstream 9207 true Chr06: 39072600-39081806 Eucalyptus grandis
Eucgr.F02698 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39076807-39081806 Eucalyptus grandis
Eucgr.F02698 5.0kb downstream 5.0kb downstream 9207 true Chr06: 39067600-39076806 Eucalyptus grandis
Eucgr.F02698 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39067600-39072599 Eucalyptus grandis
Eucgr.F02698 10.0kb upstream 10.0kb upstream 14207 true Chr06: 39072600-39086806 Eucalyptus grandis
Eucgr.F02698 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39076807-39086806 Eucalyptus grandis
Eucgr.F02698 10.0kb downstream 10.0kb downstream 14207 true Chr06: 39062600-39076806 Eucalyptus grandis
Eucgr.F02698 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39062600-39072599 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050457 5270 Rosid View MSA
123748819 5271 Pentapetalae View MSA
122793120 5272 Eudicot View MSA
122044425 5273 Angiosperm View MSA
121310294 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.78656 0.0 15.9391    
cufflinks 19.1897 0.0 42.5451   High
cufflinks 6.75552 0.0 15.8811    
cufflinks 15.5686 0.0 34.689   High
cufflinks 4.71115 0.0 11.461   Low
cufflinks 8.51286 0.0 19.6165    

0 Strain