Gene : Eucgr.F02676 E. grandis v2.0
Defline:  (1 of 1) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase Genomic Order:  2348
Name:  ? Eucgr.F02676 Secondary Identifier:  ? PAC:32054432
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6599 Eucalyptus grandis pathologic  
Egrandis PWY-6609 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02676 0.5kb upstream 0.5kb upstream 3129 true Chr06: 38905319-38908447 Eucalyptus grandis
Eucgr.F02676 0.5kb upstream 0.5kb upstream 500 false Chr06: 38905319-38905818 Eucalyptus grandis
Eucgr.F02676 0.5kb downstream 0.5kb downstream 3129 true Chr06: 38905819-38908947 Eucalyptus grandis
Eucgr.F02676 0.5kb downstream 0.5kb downstream 500 false Chr06: 38908448-38908947 Eucalyptus grandis
Eucgr.F02676 1.0kb upstream 1.0kb upstream 3629 true Chr06: 38904819-38908447 Eucalyptus grandis
Eucgr.F02676 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38904819-38905818 Eucalyptus grandis
Eucgr.F02676 1.0kb downstream 1.0kb downstream 3629 true Chr06: 38905819-38909447 Eucalyptus grandis
Eucgr.F02676 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38908448-38909447 Eucalyptus grandis
Eucgr.F02676 2.0kb upstream 2.0kb upstream 4629 true Chr06: 38903819-38908447 Eucalyptus grandis
Eucgr.F02676 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38903819-38905818 Eucalyptus grandis
Eucgr.F02676 2.0kb downstream 2.0kb downstream 4629 true Chr06: 38905819-38910447 Eucalyptus grandis
Eucgr.F02676 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38908448-38910447 Eucalyptus grandis
Eucgr.F02676 5.0kb upstream 5.0kb upstream 7629 true Chr06: 38900819-38908447 Eucalyptus grandis
Eucgr.F02676 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38900819-38905818 Eucalyptus grandis
Eucgr.F02676 5.0kb downstream 5.0kb downstream 7629 true Chr06: 38905819-38913447 Eucalyptus grandis
Eucgr.F02676 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38908448-38913447 Eucalyptus grandis
Eucgr.F02676 10.0kb upstream 10.0kb upstream 12629 true Chr06: 38895819-38908447 Eucalyptus grandis
Eucgr.F02676 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38895819-38905818 Eucalyptus grandis
Eucgr.F02676 10.0kb downstream 10.0kb downstream 12629 true Chr06: 38905819-38918447 Eucalyptus grandis
Eucgr.F02676 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38908448-38918447 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065096 5270 Rosid View MSA
123736484 5271 Pentapetalae View MSA
122787772 5272 Eudicot View MSA
122042893 5273 Angiosperm View MSA
121347009 5274 Embryophyte View MSA
123425408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.00052 0.0 8.34041   Low
cufflinks 6.60645 0.0 16.9744    
cufflinks 5.76981 0.0 15.0427    
cufflinks 5.80543 0.0 15.0941    
cufflinks 9.85591 0.0 24.3723   High
cufflinks 7.30753 0.0 18.5385    

0 Strain