Gene : Eucgr.F02662 E. grandis v2.0
Defline:  (1 of 2) PTHR19878:SF4 - TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN Genomic Order:  2334
Name:  ? Eucgr.F02662 Secondary Identifier:  ? PAC:32053703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02662 0.5kb upstream 0.5kb upstream 20889 true Chr06: 38789185-38810073 Eucalyptus grandis
Eucgr.F02662 0.5kb upstream 0.5kb upstream 500 false Chr06: 38809574-38810073 Eucalyptus grandis
Eucgr.F02662 0.5kb downstream 0.5kb downstream 20889 true Chr06: 38788685-38809573 Eucalyptus grandis
Eucgr.F02662 0.5kb downstream 0.5kb downstream 500 false Chr06: 38788685-38789184 Eucalyptus grandis
Eucgr.F02662 1.0kb upstream 1.0kb upstream 21389 true Chr06: 38789185-38810573 Eucalyptus grandis
Eucgr.F02662 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38809574-38810573 Eucalyptus grandis
Eucgr.F02662 1.0kb downstream 1.0kb downstream 21389 true Chr06: 38788185-38809573 Eucalyptus grandis
Eucgr.F02662 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38788185-38789184 Eucalyptus grandis
Eucgr.F02662 2.0kb upstream 2.0kb upstream 22389 true Chr06: 38789185-38811573 Eucalyptus grandis
Eucgr.F02662 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38809574-38811573 Eucalyptus grandis
Eucgr.F02662 2.0kb downstream 2.0kb downstream 22389 true Chr06: 38787185-38809573 Eucalyptus grandis
Eucgr.F02662 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38787185-38789184 Eucalyptus grandis
Eucgr.F02662 5.0kb upstream 5.0kb upstream 25389 true Chr06: 38789185-38814573 Eucalyptus grandis
Eucgr.F02662 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38809574-38814573 Eucalyptus grandis
Eucgr.F02662 5.0kb downstream 5.0kb downstream 25389 true Chr06: 38784185-38809573 Eucalyptus grandis
Eucgr.F02662 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38784185-38789184 Eucalyptus grandis
Eucgr.F02662 10.0kb upstream 10.0kb upstream 30389 true Chr06: 38789185-38819573 Eucalyptus grandis
Eucgr.F02662 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38809574-38819573 Eucalyptus grandis
Eucgr.F02662 10.0kb downstream 10.0kb downstream 30389 true Chr06: 38779185-38809573 Eucalyptus grandis
Eucgr.F02662 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38779185-38789184 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050225 5270 Rosid View MSA
123737752 5271 Pentapetalae View MSA
122788494 5272 Eudicot View MSA
122042112 5273 Angiosperm View MSA
121345827 5274 Embryophyte View MSA
123428290 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7503 0.0 38.9172    
cufflinks 25.4798 0.0 62.3733    
cufflinks 17.0793 0.0 39.8529    
cufflinks 38.4907 0.0 111.314 High High
cufflinks 16.0604 0.0 41.9873    
cufflinks 27.3147 0.0 62.2805    

0 Strain