Gene : Eucgr.F02661 E. grandis v2.0
Defline:  (1 of 2) PTHR15189:SF7 - BRCA1-A COMPLEX SUBUNIT BRE Genomic Order:  2333
Name:  ? Eucgr.F02661 Secondary Identifier:  ? PAC:32055511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02661 0.5kb upstream 0.5kb upstream 4563 true Chr06: 38780836-38785398 Eucalyptus grandis
Eucgr.F02661 0.5kb upstream 0.5kb upstream 500 false Chr06: 38780836-38781335 Eucalyptus grandis
Eucgr.F02661 0.5kb downstream 0.5kb downstream 4563 true Chr06: 38781336-38785898 Eucalyptus grandis
Eucgr.F02661 0.5kb downstream 0.5kb downstream 500 false Chr06: 38785399-38785898 Eucalyptus grandis
Eucgr.F02661 1.0kb upstream 1.0kb upstream 5063 true Chr06: 38780336-38785398 Eucalyptus grandis
Eucgr.F02661 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38780336-38781335 Eucalyptus grandis
Eucgr.F02661 1.0kb downstream 1.0kb downstream 5063 true Chr06: 38781336-38786398 Eucalyptus grandis
Eucgr.F02661 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38785399-38786398 Eucalyptus grandis
Eucgr.F02661 2.0kb upstream 2.0kb upstream 6063 true Chr06: 38779336-38785398 Eucalyptus grandis
Eucgr.F02661 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38779336-38781335 Eucalyptus grandis
Eucgr.F02661 2.0kb downstream 2.0kb downstream 6063 true Chr06: 38781336-38787398 Eucalyptus grandis
Eucgr.F02661 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38785399-38787398 Eucalyptus grandis
Eucgr.F02661 5.0kb upstream 5.0kb upstream 9063 true Chr06: 38776336-38785398 Eucalyptus grandis
Eucgr.F02661 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38776336-38781335 Eucalyptus grandis
Eucgr.F02661 5.0kb downstream 5.0kb downstream 9063 true Chr06: 38781336-38790398 Eucalyptus grandis
Eucgr.F02661 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38785399-38790398 Eucalyptus grandis
Eucgr.F02661 10.0kb upstream 10.0kb upstream 14063 true Chr06: 38771336-38785398 Eucalyptus grandis
Eucgr.F02661 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38771336-38781335 Eucalyptus grandis
Eucgr.F02661 10.0kb downstream 10.0kb downstream 14063 true Chr06: 38781336-38795398 Eucalyptus grandis
Eucgr.F02661 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38785399-38795398 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062170 5270 Rosid View MSA
123740912 5271 Pentapetalae View MSA
122788838 5272 Eudicot View MSA
122044456 5273 Angiosperm View MSA
121345722 5274 Embryophyte View MSA
123380259 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.03636 0.0 17.0047    
cufflinks 6.64752 0.0 16.1493    
cufflinks 5.53195 0.0 13.6725   Low
cufflinks 8.20967 0.0 19.4688    
cufflinks 8.85087 0.0 20.9336    
cufflinks 10.0561 0.0 23.4755   High

0 Strain