Gene : Eucgr.F02623 E. grandis v2.0
Defline:  (1 of 7) PTHR11746//PTHR11746:SF112 - O-METHYLTRANSFERASE Genomic Order:  2297
Name:  ? Eucgr.F02623 Secondary Identifier:  ? PAC:32053787
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY-2181 Eucalyptus grandis pathologic  
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-7186 Eucalyptus grandis pathologic  
Egrandis PWY-7498 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02623 0.5kb upstream 0.5kb upstream 3043 true Chr06: 38350320-38353362 Eucalyptus grandis
Eucgr.F02623 0.5kb upstream 0.5kb upstream 500 false Chr06: 38350320-38350819 Eucalyptus grandis
Eucgr.F02623 0.5kb downstream 0.5kb downstream 3043 true Chr06: 38350820-38353862 Eucalyptus grandis
Eucgr.F02623 0.5kb downstream 0.5kb downstream 500 false Chr06: 38353363-38353862 Eucalyptus grandis
Eucgr.F02623 1.0kb upstream 1.0kb upstream 3543 true Chr06: 38349820-38353362 Eucalyptus grandis
Eucgr.F02623 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38349820-38350819 Eucalyptus grandis
Eucgr.F02623 1.0kb downstream 1.0kb downstream 3543 true Chr06: 38350820-38354362 Eucalyptus grandis
Eucgr.F02623 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38353363-38354362 Eucalyptus grandis
Eucgr.F02623 2.0kb upstream 2.0kb upstream 4543 true Chr06: 38348820-38353362 Eucalyptus grandis
Eucgr.F02623 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38348820-38350819 Eucalyptus grandis
Eucgr.F02623 2.0kb downstream 2.0kb downstream 4543 true Chr06: 38350820-38355362 Eucalyptus grandis
Eucgr.F02623 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38353363-38355362 Eucalyptus grandis
Eucgr.F02623 5.0kb upstream 5.0kb upstream 7543 true Chr06: 38345820-38353362 Eucalyptus grandis
Eucgr.F02623 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38345820-38350819 Eucalyptus grandis
Eucgr.F02623 5.0kb downstream 5.0kb downstream 7543 true Chr06: 38350820-38358362 Eucalyptus grandis
Eucgr.F02623 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38353363-38358362 Eucalyptus grandis
Eucgr.F02623 10.0kb upstream 10.0kb upstream 12543 true Chr06: 38340820-38353362 Eucalyptus grandis
Eucgr.F02623 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38340820-38350819 Eucalyptus grandis
Eucgr.F02623 10.0kb downstream 10.0kb downstream 12543 true Chr06: 38350820-38363362 Eucalyptus grandis
Eucgr.F02623 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38353363-38363362 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029927 5273 Angiosperm View MSA
124075254 5270 Rosid View MSA
123753803 5271 Pentapetalae View MSA
122775246 5272 Eudicot View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29543 0.0 4.10076    
cufflinks 22.0411 0.0 50.6278   High
cufflinks 0.895195 0.0 3.01797   Low
cufflinks 6.97754 0.0 19.7307    
cufflinks 5.51622 0.0 13.9482    
cufflinks 1.45589 0.0 4.57894    

0 Strain