Gene : Eucgr.F02578 E. grandis v2.0
Defline:  (1 of 1) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED Genomic Order:  2258
Name:  ? Eucgr.F02578 Secondary Identifier:  ? PAC:32052523
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02578 0.5kb upstream 0.5kb upstream 10212 true Chr06: 37830180-37840391 Eucalyptus grandis
Eucgr.F02578 0.5kb upstream 0.5kb upstream 500 false Chr06: 37839892-37840391 Eucalyptus grandis
Eucgr.F02578 0.5kb downstream 0.5kb downstream 10212 true Chr06: 37829680-37839891 Eucalyptus grandis
Eucgr.F02578 0.5kb downstream 0.5kb downstream 500 false Chr06: 37829680-37830179 Eucalyptus grandis
Eucgr.F02578 1.0kb upstream 1.0kb upstream 10712 true Chr06: 37830180-37840891 Eucalyptus grandis
Eucgr.F02578 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37839892-37840891 Eucalyptus grandis
Eucgr.F02578 1.0kb downstream 1.0kb downstream 10712 true Chr06: 37829180-37839891 Eucalyptus grandis
Eucgr.F02578 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37829180-37830179 Eucalyptus grandis
Eucgr.F02578 2.0kb upstream 2.0kb upstream 11712 true Chr06: 37830180-37841891 Eucalyptus grandis
Eucgr.F02578 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37839892-37841891 Eucalyptus grandis
Eucgr.F02578 2.0kb downstream 2.0kb downstream 11712 true Chr06: 37828180-37839891 Eucalyptus grandis
Eucgr.F02578 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37828180-37830179 Eucalyptus grandis
Eucgr.F02578 5.0kb upstream 5.0kb upstream 14712 true Chr06: 37830180-37844891 Eucalyptus grandis
Eucgr.F02578 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37839892-37844891 Eucalyptus grandis
Eucgr.F02578 5.0kb downstream 5.0kb downstream 14712 true Chr06: 37825180-37839891 Eucalyptus grandis
Eucgr.F02578 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37825180-37830179 Eucalyptus grandis
Eucgr.F02578 10.0kb upstream 10.0kb upstream 19712 true Chr06: 37830180-37849891 Eucalyptus grandis
Eucgr.F02578 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37839892-37849891 Eucalyptus grandis
Eucgr.F02578 10.0kb downstream 10.0kb downstream 19712 true Chr06: 37820180-37839891 Eucalyptus grandis
Eucgr.F02578 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37820180-37830179 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060642 5270 Rosid View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4961 0.0 39.7167   High
cufflinks 1.77137 0.0 5.01677    
cufflinks 3.52348 0.0 9.27289    
cufflinks 8.83559 0.0 21.1301    
cufflinks 0.389944 0.0 1.3201 Low Low
cufflinks 3.40947 0.0 9.00209    

0 Strain