Gene : Eucgr.F02544 E. grandis v2.0
Defline:  (1 of 1) PTHR12914 - PARTNER OF SLD5 Genomic Order:  2227
Name:  ? Eucgr.F02544 Secondary Identifier:  ? PAC:32053280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02544 0.5kb upstream 0.5kb upstream 3326 true Chr06: 37537356-37540681 Eucalyptus grandis
Eucgr.F02544 0.5kb upstream 0.5kb upstream 500 false Chr06: 37537356-37537855 Eucalyptus grandis
Eucgr.F02544 0.5kb downstream 0.5kb downstream 3326 true Chr06: 37537856-37541181 Eucalyptus grandis
Eucgr.F02544 0.5kb downstream 0.5kb downstream 500 false Chr06: 37540682-37541181 Eucalyptus grandis
Eucgr.F02544 1.0kb upstream 1.0kb upstream 3826 true Chr06: 37536856-37540681 Eucalyptus grandis
Eucgr.F02544 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37536856-37537855 Eucalyptus grandis
Eucgr.F02544 1.0kb downstream 1.0kb downstream 3826 true Chr06: 37537856-37541681 Eucalyptus grandis
Eucgr.F02544 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37540682-37541681 Eucalyptus grandis
Eucgr.F02544 2.0kb upstream 2.0kb upstream 4826 true Chr06: 37535856-37540681 Eucalyptus grandis
Eucgr.F02544 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37535856-37537855 Eucalyptus grandis
Eucgr.F02544 2.0kb downstream 2.0kb downstream 4826 true Chr06: 37537856-37542681 Eucalyptus grandis
Eucgr.F02544 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37540682-37542681 Eucalyptus grandis
Eucgr.F02544 5.0kb upstream 5.0kb upstream 7826 true Chr06: 37532856-37540681 Eucalyptus grandis
Eucgr.F02544 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37532856-37537855 Eucalyptus grandis
Eucgr.F02544 5.0kb downstream 5.0kb downstream 7826 true Chr06: 37537856-37545681 Eucalyptus grandis
Eucgr.F02544 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37540682-37545681 Eucalyptus grandis
Eucgr.F02544 10.0kb upstream 10.0kb upstream 12826 true Chr06: 37527856-37540681 Eucalyptus grandis
Eucgr.F02544 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37527856-37537855 Eucalyptus grandis
Eucgr.F02544 10.0kb downstream 10.0kb downstream 12826 true Chr06: 37537856-37550681 Eucalyptus grandis
Eucgr.F02544 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37540682-37550681 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065475 5270 Rosid View MSA
123736911 5271 Pentapetalae View MSA
122793813 5272 Eudicot View MSA
122045601 5273 Angiosperm View MSA
121344655 5274 Embryophyte View MSA
123424278 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.65298 0.0 8.14792   High
cufflinks 0.727234 0.0 2.82311 Low  
cufflinks 1.21591 0.0 4.2744    
cufflinks 0.901503 0.0 3.25696    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.907969 0.0 3.52861    

0 Strain