Gene : Eucgr.F02498 E. grandis v2.0
Defline:  (1 of 1) 5.3.1.8 - Mannose-6-phosphate isomerase / Phosphomannose isomerase Genomic Order:  2187
Name:  ? Eucgr.F02498 Secondary Identifier:  ? PAC:32054877
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis MANNCAT-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3881 Eucalyptus grandis pathologic  
Egrandis PWY-5659 Eucalyptus grandis pathologic  
Egrandis PWY-882 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02498 0.5kb upstream 0.5kb upstream 4947 true Chr06: 37105918-37110864 Eucalyptus grandis
Eucgr.F02498 0.5kb upstream 0.5kb upstream 500 false Chr06: 37110365-37110864 Eucalyptus grandis
Eucgr.F02498 0.5kb downstream 0.5kb downstream 4947 true Chr06: 37105418-37110364 Eucalyptus grandis
Eucgr.F02498 0.5kb downstream 0.5kb downstream 500 false Chr06: 37105418-37105917 Eucalyptus grandis
Eucgr.F02498 1.0kb upstream 1.0kb upstream 5447 true Chr06: 37105918-37111364 Eucalyptus grandis
Eucgr.F02498 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37110365-37111364 Eucalyptus grandis
Eucgr.F02498 1.0kb downstream 1.0kb downstream 5447 true Chr06: 37104918-37110364 Eucalyptus grandis
Eucgr.F02498 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37104918-37105917 Eucalyptus grandis
Eucgr.F02498 2.0kb upstream 2.0kb upstream 6447 true Chr06: 37105918-37112364 Eucalyptus grandis
Eucgr.F02498 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37110365-37112364 Eucalyptus grandis
Eucgr.F02498 2.0kb downstream 2.0kb downstream 6447 true Chr06: 37103918-37110364 Eucalyptus grandis
Eucgr.F02498 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37103918-37105917 Eucalyptus grandis
Eucgr.F02498 5.0kb upstream 5.0kb upstream 9447 true Chr06: 37105918-37115364 Eucalyptus grandis
Eucgr.F02498 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37110365-37115364 Eucalyptus grandis
Eucgr.F02498 5.0kb downstream 5.0kb downstream 9447 true Chr06: 37100918-37110364 Eucalyptus grandis
Eucgr.F02498 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37100918-37105917 Eucalyptus grandis
Eucgr.F02498 10.0kb upstream 10.0kb upstream 14447 true Chr06: 37105918-37120364 Eucalyptus grandis
Eucgr.F02498 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37110365-37120364 Eucalyptus grandis
Eucgr.F02498 10.0kb downstream 10.0kb downstream 14447 true Chr06: 37095918-37110364 Eucalyptus grandis
Eucgr.F02498 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37095918-37105917 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062698 5270 Rosid View MSA
123747047 5271 Pentapetalae View MSA
122796882 5272 Eudicot View MSA
122046941 5273 Angiosperm View MSA
121350841 5274 Embryophyte View MSA
123423837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.108 0.0 40.729    
cufflinks 16.1193 0.0 36.4594    
cufflinks 19.0342 0.0 48.443    
cufflinks 35.8238 0.0 82.4682    
cufflinks 73.5427 0.0 200.914 High High
cufflinks 12.0906 0.0 28.1319   Low

0 Strain