Gene : Eucgr.F02483 E. grandis v2.0
Defline:  (1 of 1) PTHR11353:SF21 - T-COMPLEX PROTEIN 1 SUBUNIT ZETA Genomic Order:  2174
Name:  ? Eucgr.F02483 Secondary Identifier:  ? PAC:32055596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02483 0.5kb upstream 0.5kb upstream 8086 true Chr06: 36884125-36892210 Eucalyptus grandis
Eucgr.F02483 0.5kb upstream 0.5kb upstream 500 false Chr06: 36891711-36892210 Eucalyptus grandis
Eucgr.F02483 0.5kb downstream 0.5kb downstream 8086 true Chr06: 36883625-36891710 Eucalyptus grandis
Eucgr.F02483 0.5kb downstream 0.5kb downstream 500 false Chr06: 36883625-36884124 Eucalyptus grandis
Eucgr.F02483 1.0kb upstream 1.0kb upstream 8586 true Chr06: 36884125-36892710 Eucalyptus grandis
Eucgr.F02483 1.0kb upstream 1.0kb upstream 1000 false Chr06: 36891711-36892710 Eucalyptus grandis
Eucgr.F02483 1.0kb downstream 1.0kb downstream 8586 true Chr06: 36883125-36891710 Eucalyptus grandis
Eucgr.F02483 1.0kb downstream 1.0kb downstream 1000 false Chr06: 36883125-36884124 Eucalyptus grandis
Eucgr.F02483 2.0kb upstream 2.0kb upstream 9586 true Chr06: 36884125-36893710 Eucalyptus grandis
Eucgr.F02483 2.0kb upstream 2.0kb upstream 2000 false Chr06: 36891711-36893710 Eucalyptus grandis
Eucgr.F02483 2.0kb downstream 2.0kb downstream 9586 true Chr06: 36882125-36891710 Eucalyptus grandis
Eucgr.F02483 2.0kb downstream 2.0kb downstream 2000 false Chr06: 36882125-36884124 Eucalyptus grandis
Eucgr.F02483 5.0kb upstream 5.0kb upstream 12586 true Chr06: 36884125-36896710 Eucalyptus grandis
Eucgr.F02483 5.0kb upstream 5.0kb upstream 5000 false Chr06: 36891711-36896710 Eucalyptus grandis
Eucgr.F02483 5.0kb downstream 5.0kb downstream 12586 true Chr06: 36879125-36891710 Eucalyptus grandis
Eucgr.F02483 5.0kb downstream 5.0kb downstream 5000 false Chr06: 36879125-36884124 Eucalyptus grandis
Eucgr.F02483 10.0kb upstream 10.0kb upstream 17586 true Chr06: 36884125-36901710 Eucalyptus grandis
Eucgr.F02483 10.0kb upstream 10.0kb upstream 10000 false Chr06: 36891711-36901710 Eucalyptus grandis
Eucgr.F02483 10.0kb downstream 10.0kb downstream 17586 true Chr06: 36874125-36891710 Eucalyptus grandis
Eucgr.F02483 10.0kb downstream 10.0kb downstream 10000 false Chr06: 36874125-36884124 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066156 5270 Rosid View MSA
123744812 5271 Pentapetalae View MSA
122790863 5272 Eudicot View MSA
122045313 5273 Angiosperm View MSA
121344896 5274 Embryophyte View MSA
123424625 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.6663 0.0 70.3257 High  
cufflinks 35.2441 0.0 81.7356    
cufflinks 31.1059 0.0 71.2969 High  
cufflinks 47.3812 0.0 112.87 High  
cufflinks 64.4588 0.0 147.73 High High
cufflinks 25.9331 0.0 58.5527   Low

0 Strain