Gene : Eucgr.F02475 E. grandis v2.0
Defline:  (1 of 1) PTHR21136//PTHR21136:SF89 - SNARE PROTEINS Genomic Order:  2166
Name:  ? Eucgr.F02475 Secondary Identifier:  ? PAC:32056969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02475 0.5kb upstream 0.5kb upstream 3296 true Chr06: 36816481-36819776 Eucalyptus grandis
Eucgr.F02475 0.5kb upstream 0.5kb upstream 500 false Chr06: 36819277-36819776 Eucalyptus grandis
Eucgr.F02475 0.5kb downstream 0.5kb downstream 3296 true Chr06: 36815981-36819276 Eucalyptus grandis
Eucgr.F02475 0.5kb downstream 0.5kb downstream 500 false Chr06: 36815981-36816480 Eucalyptus grandis
Eucgr.F02475 1.0kb upstream 1.0kb upstream 3796 true Chr06: 36816481-36820276 Eucalyptus grandis
Eucgr.F02475 1.0kb upstream 1.0kb upstream 1000 false Chr06: 36819277-36820276 Eucalyptus grandis
Eucgr.F02475 1.0kb downstream 1.0kb downstream 3796 true Chr06: 36815481-36819276 Eucalyptus grandis
Eucgr.F02475 1.0kb downstream 1.0kb downstream 1000 false Chr06: 36815481-36816480 Eucalyptus grandis
Eucgr.F02475 2.0kb upstream 2.0kb upstream 4796 true Chr06: 36816481-36821276 Eucalyptus grandis
Eucgr.F02475 2.0kb upstream 2.0kb upstream 2000 false Chr06: 36819277-36821276 Eucalyptus grandis
Eucgr.F02475 2.0kb downstream 2.0kb downstream 4796 true Chr06: 36814481-36819276 Eucalyptus grandis
Eucgr.F02475 2.0kb downstream 2.0kb downstream 2000 false Chr06: 36814481-36816480 Eucalyptus grandis
Eucgr.F02475 5.0kb upstream 5.0kb upstream 7796 true Chr06: 36816481-36824276 Eucalyptus grandis
Eucgr.F02475 5.0kb upstream 5.0kb upstream 5000 false Chr06: 36819277-36824276 Eucalyptus grandis
Eucgr.F02475 5.0kb downstream 5.0kb downstream 7796 true Chr06: 36811481-36819276 Eucalyptus grandis
Eucgr.F02475 5.0kb downstream 5.0kb downstream 5000 false Chr06: 36811481-36816480 Eucalyptus grandis
Eucgr.F02475 10.0kb upstream 10.0kb upstream 12796 true Chr06: 36816481-36829276 Eucalyptus grandis
Eucgr.F02475 10.0kb upstream 10.0kb upstream 10000 false Chr06: 36819277-36829276 Eucalyptus grandis
Eucgr.F02475 10.0kb downstream 10.0kb downstream 12796 true Chr06: 36806481-36819276 Eucalyptus grandis
Eucgr.F02475 10.0kb downstream 10.0kb downstream 10000 false Chr06: 36806481-36816480 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065843 5270 Rosid View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.8373 0.0 78.5521 High  
cufflinks 47.7553 0.0 109.622 High  
cufflinks 33.1115 0.0 74.2781 High Low
cufflinks 74.4336 0.0 177.329 High High
cufflinks 48.5501 0.0 111.945 High  
cufflinks 41.0805 0.0 106.278 High  

0 Strain