Gene : Eucgr.F02477 E. grandis v2.0
Defline:  (1 of 2) PTHR31008:SF3 - COP1-INTERACTING PROTEIN-RELATED PROTEIN-RELATED Genomic Order:  2168
Name:  ? Eucgr.F02477 Secondary Identifier:  ? PAC:32055123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02477 0.5kb upstream 0.5kb upstream 11120 true Chr06: 36827836-36838955 Eucalyptus grandis
Eucgr.F02477 0.5kb upstream 0.5kb upstream 500 false Chr06: 36838456-36838955 Eucalyptus grandis
Eucgr.F02477 0.5kb downstream 0.5kb downstream 11120 true Chr06: 36827336-36838455 Eucalyptus grandis
Eucgr.F02477 0.5kb downstream 0.5kb downstream 500 false Chr06: 36827336-36827835 Eucalyptus grandis
Eucgr.F02477 1.0kb upstream 1.0kb upstream 11620 true Chr06: 36827836-36839455 Eucalyptus grandis
Eucgr.F02477 1.0kb upstream 1.0kb upstream 1000 false Chr06: 36838456-36839455 Eucalyptus grandis
Eucgr.F02477 1.0kb downstream 1.0kb downstream 11620 true Chr06: 36826836-36838455 Eucalyptus grandis
Eucgr.F02477 1.0kb downstream 1.0kb downstream 1000 false Chr06: 36826836-36827835 Eucalyptus grandis
Eucgr.F02477 2.0kb upstream 2.0kb upstream 12620 true Chr06: 36827836-36840455 Eucalyptus grandis
Eucgr.F02477 2.0kb upstream 2.0kb upstream 2000 false Chr06: 36838456-36840455 Eucalyptus grandis
Eucgr.F02477 2.0kb downstream 2.0kb downstream 12620 true Chr06: 36825836-36838455 Eucalyptus grandis
Eucgr.F02477 2.0kb downstream 2.0kb downstream 2000 false Chr06: 36825836-36827835 Eucalyptus grandis
Eucgr.F02477 5.0kb upstream 5.0kb upstream 15620 true Chr06: 36827836-36843455 Eucalyptus grandis
Eucgr.F02477 5.0kb upstream 5.0kb upstream 5000 false Chr06: 36838456-36843455 Eucalyptus grandis
Eucgr.F02477 5.0kb downstream 5.0kb downstream 15620 true Chr06: 36822836-36838455 Eucalyptus grandis
Eucgr.F02477 5.0kb downstream 5.0kb downstream 5000 false Chr06: 36822836-36827835 Eucalyptus grandis
Eucgr.F02477 10.0kb upstream 10.0kb upstream 20620 true Chr06: 36827836-36848455 Eucalyptus grandis
Eucgr.F02477 10.0kb upstream 10.0kb upstream 10000 false Chr06: 36838456-36848455 Eucalyptus grandis
Eucgr.F02477 10.0kb downstream 10.0kb downstream 20620 true Chr06: 36817836-36838455 Eucalyptus grandis
Eucgr.F02477 10.0kb downstream 10.0kb downstream 10000 false Chr06: 36817836-36827835 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070250 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0986 0.0 35.039    
cufflinks 13.4213 0.0 31.1456    
cufflinks 11.6122 0.0 26.6922    
cufflinks 16.2297 0.0 38.5615   High
cufflinks 11.4046 0.0 26.1553    
cufflinks 11.7622 0.0 26.9053    

0 Strain