Gene : Eucgr.F02400 E. grandis v2.0
Defline:  (1 of 1) PTHR12869 - SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN Genomic Order:  1817
Name:  ? Eucgr.F02400 Secondary Identifier:  ? PAC:32056147
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02400 0.5kb upstream 0.5kb upstream 4836 true Chr06: 30254200-30259035 Eucalyptus grandis
Eucgr.F02400 0.5kb upstream 0.5kb upstream 500 false Chr06: 30254200-30254699 Eucalyptus grandis
Eucgr.F02400 0.5kb downstream 0.5kb downstream 4836 true Chr06: 30254700-30259535 Eucalyptus grandis
Eucgr.F02400 0.5kb downstream 0.5kb downstream 500 false Chr06: 30259036-30259535 Eucalyptus grandis
Eucgr.F02400 1.0kb upstream 1.0kb upstream 5336 true Chr06: 30253700-30259035 Eucalyptus grandis
Eucgr.F02400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30253700-30254699 Eucalyptus grandis
Eucgr.F02400 1.0kb downstream 1.0kb downstream 5336 true Chr06: 30254700-30260035 Eucalyptus grandis
Eucgr.F02400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30259036-30260035 Eucalyptus grandis
Eucgr.F02400 2.0kb upstream 2.0kb upstream 6336 true Chr06: 30252700-30259035 Eucalyptus grandis
Eucgr.F02400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30252700-30254699 Eucalyptus grandis
Eucgr.F02400 2.0kb downstream 2.0kb downstream 6336 true Chr06: 30254700-30261035 Eucalyptus grandis
Eucgr.F02400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30259036-30261035 Eucalyptus grandis
Eucgr.F02400 5.0kb upstream 5.0kb upstream 9336 true Chr06: 30249700-30259035 Eucalyptus grandis
Eucgr.F02400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30249700-30254699 Eucalyptus grandis
Eucgr.F02400 5.0kb downstream 5.0kb downstream 9336 true Chr06: 30254700-30264035 Eucalyptus grandis
Eucgr.F02400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30259036-30264035 Eucalyptus grandis
Eucgr.F02400 10.0kb upstream 10.0kb upstream 14336 true Chr06: 30244700-30259035 Eucalyptus grandis
Eucgr.F02400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30244700-30254699 Eucalyptus grandis
Eucgr.F02400 10.0kb downstream 10.0kb downstream 14336 true Chr06: 30254700-30269035 Eucalyptus grandis
Eucgr.F02400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30259036-30269035 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064823 5270 Rosid View MSA
123746245 5271 Pentapetalae View MSA
122789833 5272 Eudicot View MSA
122046816 5273 Angiosperm View MSA
121343820 5274 Embryophyte View MSA
123379923 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.2444 0.0 69.6163 High  
cufflinks 16.7505 0.0 38.755   Low
cufflinks 28.2608 0.0 65.062 High  
cufflinks 26.9073 0.0 62.2771    
cufflinks 16.2104 0.0 37.8756   Low
cufflinks 48.2283 0.0 126.423 High High

0 Strain