Gene : Eucgr.F02368 E. grandis v2.0
Defline:  (1 of 1) PTHR35703:SF1 - INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED Genomic Order:  1842
Name:  ? Eucgr.F02368 Secondary Identifier:  ? PAC:32055525
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5874 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02368 0.5kb upstream 0.5kb upstream 5201 true Chr06: 31037881-31043081 Eucalyptus grandis
Eucgr.F02368 0.5kb upstream 0.5kb upstream 500 false Chr06: 31042582-31043081 Eucalyptus grandis
Eucgr.F02368 0.5kb downstream 0.5kb downstream 5201 true Chr06: 31037381-31042581 Eucalyptus grandis
Eucgr.F02368 0.5kb downstream 0.5kb downstream 500 false Chr06: 31037381-31037880 Eucalyptus grandis
Eucgr.F02368 1.0kb upstream 1.0kb upstream 5701 true Chr06: 31037881-31043581 Eucalyptus grandis
Eucgr.F02368 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31042582-31043581 Eucalyptus grandis
Eucgr.F02368 1.0kb downstream 1.0kb downstream 5701 true Chr06: 31036881-31042581 Eucalyptus grandis
Eucgr.F02368 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31036881-31037880 Eucalyptus grandis
Eucgr.F02368 2.0kb upstream 2.0kb upstream 6701 true Chr06: 31037881-31044581 Eucalyptus grandis
Eucgr.F02368 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31042582-31044581 Eucalyptus grandis
Eucgr.F02368 2.0kb downstream 2.0kb downstream 6701 true Chr06: 31035881-31042581 Eucalyptus grandis
Eucgr.F02368 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31035881-31037880 Eucalyptus grandis
Eucgr.F02368 5.0kb upstream 5.0kb upstream 9701 true Chr06: 31037881-31047581 Eucalyptus grandis
Eucgr.F02368 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31042582-31047581 Eucalyptus grandis
Eucgr.F02368 5.0kb downstream 5.0kb downstream 9701 true Chr06: 31032881-31042581 Eucalyptus grandis
Eucgr.F02368 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31032881-31037880 Eucalyptus grandis
Eucgr.F02368 10.0kb upstream 10.0kb upstream 14701 true Chr06: 31037881-31052581 Eucalyptus grandis
Eucgr.F02368 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31042582-31052581 Eucalyptus grandis
Eucgr.F02368 10.0kb downstream 10.0kb downstream 14701 true Chr06: 31027881-31042581 Eucalyptus grandis
Eucgr.F02368 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31027881-31037880 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063078 5270 Rosid View MSA
123741198 5271 Pentapetalae View MSA
122793273 5272 Eudicot View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8682 0.0 5.02487    
cufflinks 6.19845 0.0 14.7961    
cufflinks 5.53888 0.0 13.3632    
cufflinks 1.5613 0.0 4.2606    
cufflinks 1.54218 0.0 4.22905   Low
cufflinks 6.11719 0.0 14.5648    

0 Strain