Gene : Eucgr.F03040 E. grandis v2.0
Defline:  (1 of 1) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 Genomic Order:  2693
Name:  ? Eucgr.F03040 Secondary Identifier:  ? PAC:32057088
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03040 0.5kb upstream 0.5kb upstream 5657 true Chr06: 42383789-42389445 Eucalyptus grandis
Eucgr.F03040 0.5kb upstream 0.5kb upstream 500 false Chr06: 42388946-42389445 Eucalyptus grandis
Eucgr.F03040 0.5kb downstream 0.5kb downstream 5657 true Chr06: 42383289-42388945 Eucalyptus grandis
Eucgr.F03040 0.5kb downstream 0.5kb downstream 500 false Chr06: 42383289-42383788 Eucalyptus grandis
Eucgr.F03040 1.0kb upstream 1.0kb upstream 6157 true Chr06: 42383789-42389945 Eucalyptus grandis
Eucgr.F03040 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42388946-42389945 Eucalyptus grandis
Eucgr.F03040 1.0kb downstream 1.0kb downstream 6157 true Chr06: 42382789-42388945 Eucalyptus grandis
Eucgr.F03040 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42382789-42383788 Eucalyptus grandis
Eucgr.F03040 2.0kb upstream 2.0kb upstream 7157 true Chr06: 42383789-42390945 Eucalyptus grandis
Eucgr.F03040 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42388946-42390945 Eucalyptus grandis
Eucgr.F03040 2.0kb downstream 2.0kb downstream 7157 true Chr06: 42381789-42388945 Eucalyptus grandis
Eucgr.F03040 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42381789-42383788 Eucalyptus grandis
Eucgr.F03040 5.0kb upstream 5.0kb upstream 10157 true Chr06: 42383789-42393945 Eucalyptus grandis
Eucgr.F03040 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42388946-42393945 Eucalyptus grandis
Eucgr.F03040 5.0kb downstream 5.0kb downstream 10157 true Chr06: 42378789-42388945 Eucalyptus grandis
Eucgr.F03040 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42378789-42383788 Eucalyptus grandis
Eucgr.F03040 10.0kb upstream 10.0kb upstream 15157 true Chr06: 42383789-42398945 Eucalyptus grandis
Eucgr.F03040 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42388946-42398945 Eucalyptus grandis
Eucgr.F03040 10.0kb downstream 10.0kb downstream 15157 true Chr06: 42373789-42388945 Eucalyptus grandis
Eucgr.F03040 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42373789-42383788 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070351 5270 Rosid View MSA
123746219 5271 Pentapetalae View MSA
122794350 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9745 0.0 39.9569    
cufflinks 9.72091 0.0 26.9207    
cufflinks 20.5326 0.0 52.0145    
cufflinks 0.438132 0.0 1.46685   Low
cufflinks 0.940077 0.0 2.86851   Low
cufflinks 18.1927 0.0 47.9722    

0 Strain