Gene : Eucgr.F03054 E. grandis v2.0
Defline:  (1 of 1) PTHR19139:SF99 - AQUAPORIN TIP2-1 Genomic Order:  2707
Name:  ? Eucgr.F03054 Secondary Identifier:  ? PAC:32054840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03054 0.5kb upstream 0.5kb upstream 2505 true Chr06: 42511387-42513891 Eucalyptus grandis
Eucgr.F03054 0.5kb upstream 0.5kb upstream 500 false Chr06: 42511387-42511886 Eucalyptus grandis
Eucgr.F03054 0.5kb downstream 0.5kb downstream 2505 true Chr06: 42511887-42514391 Eucalyptus grandis
Eucgr.F03054 0.5kb downstream 0.5kb downstream 500 false Chr06: 42513892-42514391 Eucalyptus grandis
Eucgr.F03054 1.0kb upstream 1.0kb upstream 3005 true Chr06: 42510887-42513891 Eucalyptus grandis
Eucgr.F03054 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42510887-42511886 Eucalyptus grandis
Eucgr.F03054 1.0kb downstream 1.0kb downstream 3005 true Chr06: 42511887-42514891 Eucalyptus grandis
Eucgr.F03054 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42513892-42514891 Eucalyptus grandis
Eucgr.F03054 2.0kb upstream 2.0kb upstream 4005 true Chr06: 42509887-42513891 Eucalyptus grandis
Eucgr.F03054 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42509887-42511886 Eucalyptus grandis
Eucgr.F03054 2.0kb downstream 2.0kb downstream 4005 true Chr06: 42511887-42515891 Eucalyptus grandis
Eucgr.F03054 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42513892-42515891 Eucalyptus grandis
Eucgr.F03054 5.0kb upstream 5.0kb upstream 7005 true Chr06: 42506887-42513891 Eucalyptus grandis
Eucgr.F03054 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42506887-42511886 Eucalyptus grandis
Eucgr.F03054 5.0kb downstream 5.0kb downstream 7005 true Chr06: 42511887-42518891 Eucalyptus grandis
Eucgr.F03054 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42513892-42518891 Eucalyptus grandis
Eucgr.F03054 10.0kb upstream 10.0kb upstream 12005 true Chr06: 42501887-42513891 Eucalyptus grandis
Eucgr.F03054 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42501887-42511886 Eucalyptus grandis
Eucgr.F03054 10.0kb downstream 10.0kb downstream 12005 true Chr06: 42511887-42523891 Eucalyptus grandis
Eucgr.F03054 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42513892-42523891 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068633 5270 Rosid View MSA
123744142 5271 Pentapetalae View MSA
122790430 5272 Eudicot View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 123.877 0.0 278.271 High High
cufflinks 82.873 0.0 183.973 High  
cufflinks 78.0476 0.0 172.885 High  
cufflinks 90.1611 0.0 200.443 High  
cufflinks 131.182 0.0 295.937 High High
cufflinks 74.0476 0.0 163.899 High  

0 Strain