Gene : Eucgr.F03011 E. grandis v2.0
Defline:  (1 of 4) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 Genomic Order:  2666
Name:  ? Eucgr.F03011 Secondary Identifier:  ? PAC:32053277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03011 0.5kb upstream 0.5kb upstream 11487 true Chr06: 42222544-42234030 Eucalyptus grandis
Eucgr.F03011 0.5kb upstream 0.5kb upstream 500 false Chr06: 42233531-42234030 Eucalyptus grandis
Eucgr.F03011 0.5kb downstream 0.5kb downstream 11487 true Chr06: 42222044-42233530 Eucalyptus grandis
Eucgr.F03011 0.5kb downstream 0.5kb downstream 500 false Chr06: 42222044-42222543 Eucalyptus grandis
Eucgr.F03011 1.0kb upstream 1.0kb upstream 11987 true Chr06: 42222544-42234530 Eucalyptus grandis
Eucgr.F03011 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42233531-42234530 Eucalyptus grandis
Eucgr.F03011 1.0kb downstream 1.0kb downstream 11987 true Chr06: 42221544-42233530 Eucalyptus grandis
Eucgr.F03011 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42221544-42222543 Eucalyptus grandis
Eucgr.F03011 2.0kb upstream 2.0kb upstream 12987 true Chr06: 42222544-42235530 Eucalyptus grandis
Eucgr.F03011 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42233531-42235530 Eucalyptus grandis
Eucgr.F03011 2.0kb downstream 2.0kb downstream 12987 true Chr06: 42220544-42233530 Eucalyptus grandis
Eucgr.F03011 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42220544-42222543 Eucalyptus grandis
Eucgr.F03011 5.0kb upstream 5.0kb upstream 15987 true Chr06: 42222544-42238530 Eucalyptus grandis
Eucgr.F03011 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42233531-42238530 Eucalyptus grandis
Eucgr.F03011 5.0kb downstream 5.0kb downstream 15987 true Chr06: 42217544-42233530 Eucalyptus grandis
Eucgr.F03011 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42217544-42222543 Eucalyptus grandis
Eucgr.F03011 10.0kb upstream 10.0kb upstream 20987 true Chr06: 42222544-42243530 Eucalyptus grandis
Eucgr.F03011 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42233531-42243530 Eucalyptus grandis
Eucgr.F03011 10.0kb downstream 10.0kb downstream 20987 true Chr06: 42212544-42233530 Eucalyptus grandis
Eucgr.F03011 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42212544-42222543 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066819 5270 Rosid View MSA
123745194 5271 Pentapetalae View MSA
122792729 5272 Eudicot View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.0969 0.0 144.071 High  
cufflinks 81.9737 0.0 236.272 High  
cufflinks 44.5583 0.0 125.315 High  
cufflinks 122.519 0.0 442.987 High High
cufflinks 39.1878 0.0 119.106 High Low
cufflinks 62.8716 0.0 169.187 High  

0 Strain