Gene : Eucgr.F03003 E. grandis v2.0
Defline:  (1 of 1) PF02428 - Potato type II proteinase inhibitor family (Prot_inhib_II) Genomic Order:  2659
Name:  ? Eucgr.F03003 Secondary Identifier:  ? PAC:32055790
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03003 0.5kb upstream 0.5kb upstream 1219 true Chr06: 42154987-42156205 Eucalyptus grandis
Eucgr.F03003 0.5kb upstream 0.5kb upstream 500 false Chr06: 42155706-42156205 Eucalyptus grandis
Eucgr.F03003 0.5kb downstream 0.5kb downstream 1219 true Chr06: 42154487-42155705 Eucalyptus grandis
Eucgr.F03003 0.5kb downstream 0.5kb downstream 500 false Chr06: 42154487-42154986 Eucalyptus grandis
Eucgr.F03003 1.0kb upstream 1.0kb upstream 1719 true Chr06: 42154987-42156705 Eucalyptus grandis
Eucgr.F03003 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42155706-42156705 Eucalyptus grandis
Eucgr.F03003 1.0kb downstream 1.0kb downstream 1719 true Chr06: 42153987-42155705 Eucalyptus grandis
Eucgr.F03003 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42153987-42154986 Eucalyptus grandis
Eucgr.F03003 2.0kb upstream 2.0kb upstream 2719 true Chr06: 42154987-42157705 Eucalyptus grandis
Eucgr.F03003 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42155706-42157705 Eucalyptus grandis
Eucgr.F03003 2.0kb downstream 2.0kb downstream 2719 true Chr06: 42152987-42155705 Eucalyptus grandis
Eucgr.F03003 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42152987-42154986 Eucalyptus grandis
Eucgr.F03003 5.0kb upstream 5.0kb upstream 5719 true Chr06: 42154987-42160705 Eucalyptus grandis
Eucgr.F03003 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42155706-42160705 Eucalyptus grandis
Eucgr.F03003 5.0kb downstream 5.0kb downstream 5719 true Chr06: 42149987-42155705 Eucalyptus grandis
Eucgr.F03003 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42149987-42154986 Eucalyptus grandis
Eucgr.F03003 10.0kb upstream 10.0kb upstream 10719 true Chr06: 42154987-42165705 Eucalyptus grandis
Eucgr.F03003 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42155706-42165705 Eucalyptus grandis
Eucgr.F03003 10.0kb downstream 10.0kb downstream 10719 true Chr06: 42144987-42155705 Eucalyptus grandis
Eucgr.F03003 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42144987-42154986 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029766 5273 Angiosperm View MSA
124069322 5270 Rosid View MSA
123741953 5271 Pentapetalae View MSA
122770167 5272 Eudicot View MSA
121299052 5274 Embryophyte View MSA
123336975 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13338 0.0 3.86137   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.20425 0.0 12.19    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.60777 0.0 15.8686    

0 Strain