Gene : Eucgr.F02988 E. grandis v2.0
Defline:  (1 of 1) PTHR10073:SF40 - DNA MISMATCH REPAIR PROTEIN MLH1 Genomic Order:  2644
Name:  ? Eucgr.F02988 Secondary Identifier:  ? PAC:32055453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02988 0.5kb upstream 0.5kb upstream 14208 true Chr06: 42007072-42021279 Eucalyptus grandis
Eucgr.F02988 0.5kb upstream 0.5kb upstream 500 false Chr06: 42020780-42021279 Eucalyptus grandis
Eucgr.F02988 0.5kb downstream 0.5kb downstream 14208 true Chr06: 42006572-42020779 Eucalyptus grandis
Eucgr.F02988 0.5kb downstream 0.5kb downstream 500 false Chr06: 42006572-42007071 Eucalyptus grandis
Eucgr.F02988 1.0kb upstream 1.0kb upstream 14708 true Chr06: 42007072-42021779 Eucalyptus grandis
Eucgr.F02988 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42020780-42021779 Eucalyptus grandis
Eucgr.F02988 1.0kb downstream 1.0kb downstream 14708 true Chr06: 42006072-42020779 Eucalyptus grandis
Eucgr.F02988 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42006072-42007071 Eucalyptus grandis
Eucgr.F02988 2.0kb upstream 2.0kb upstream 15708 true Chr06: 42007072-42022779 Eucalyptus grandis
Eucgr.F02988 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42020780-42022779 Eucalyptus grandis
Eucgr.F02988 2.0kb downstream 2.0kb downstream 15708 true Chr06: 42005072-42020779 Eucalyptus grandis
Eucgr.F02988 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42005072-42007071 Eucalyptus grandis
Eucgr.F02988 5.0kb upstream 5.0kb upstream 18708 true Chr06: 42007072-42025779 Eucalyptus grandis
Eucgr.F02988 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42020780-42025779 Eucalyptus grandis
Eucgr.F02988 5.0kb downstream 5.0kb downstream 18708 true Chr06: 42002072-42020779 Eucalyptus grandis
Eucgr.F02988 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42002072-42007071 Eucalyptus grandis
Eucgr.F02988 10.0kb upstream 10.0kb upstream 23708 true Chr06: 42007072-42030779 Eucalyptus grandis
Eucgr.F02988 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42020780-42030779 Eucalyptus grandis
Eucgr.F02988 10.0kb downstream 10.0kb downstream 23708 true Chr06: 41997072-42020779 Eucalyptus grandis
Eucgr.F02988 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41997072-42007071 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050491 5270 Rosid View MSA
123746957 5271 Pentapetalae View MSA
122790973 5272 Eudicot View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.34108 0.0 16.7973    
cufflinks 11.407 0.0 25.4371    
cufflinks 10.4054 0.0 23.3023    
cufflinks 11.6773 0.0 26.0136    
cufflinks 13.4392 0.0 29.8634    
cufflinks 4.77329 0.0 11.365   Low

0 Strain