Gene : Eucgr.F02952 E. grandis v2.0
Defline:  (1 of 1) 1.1.1.3//2.7.2.4 - Aspartate kinase / Aspartokinase Genomic Order:  2609
Name:  ? Eucgr.F02952 Secondary Identifier:  ? PAC:32057150
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis HOMOSERSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3001 Eucalyptus grandis pathologic  
Egrandis PWY-5097 Eucalyptus grandis pathologic  
Egrandis THRESYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02952 0.5kb upstream 0.5kb upstream 11447 true Chr06: 41707593-41719039 Eucalyptus grandis
Eucgr.F02952 0.5kb upstream 0.5kb upstream 500 false Chr06: 41707593-41708092 Eucalyptus grandis
Eucgr.F02952 0.5kb downstream 0.5kb downstream 11447 true Chr06: 41708093-41719539 Eucalyptus grandis
Eucgr.F02952 0.5kb downstream 0.5kb downstream 500 false Chr06: 41719040-41719539 Eucalyptus grandis
Eucgr.F02952 1.0kb upstream 1.0kb upstream 11947 true Chr06: 41707093-41719039 Eucalyptus grandis
Eucgr.F02952 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41707093-41708092 Eucalyptus grandis
Eucgr.F02952 1.0kb downstream 1.0kb downstream 11947 true Chr06: 41708093-41720039 Eucalyptus grandis
Eucgr.F02952 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41719040-41720039 Eucalyptus grandis
Eucgr.F02952 2.0kb upstream 2.0kb upstream 12947 true Chr06: 41706093-41719039 Eucalyptus grandis
Eucgr.F02952 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41706093-41708092 Eucalyptus grandis
Eucgr.F02952 2.0kb downstream 2.0kb downstream 12947 true Chr06: 41708093-41721039 Eucalyptus grandis
Eucgr.F02952 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41719040-41721039 Eucalyptus grandis
Eucgr.F02952 5.0kb upstream 5.0kb upstream 15947 true Chr06: 41703093-41719039 Eucalyptus grandis
Eucgr.F02952 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41703093-41708092 Eucalyptus grandis
Eucgr.F02952 5.0kb downstream 5.0kb downstream 15947 true Chr06: 41708093-41724039 Eucalyptus grandis
Eucgr.F02952 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41719040-41724039 Eucalyptus grandis
Eucgr.F02952 10.0kb upstream 10.0kb upstream 20947 true Chr06: 41698093-41719039 Eucalyptus grandis
Eucgr.F02952 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41698093-41708092 Eucalyptus grandis
Eucgr.F02952 10.0kb downstream 10.0kb downstream 20947 true Chr06: 41708093-41729039 Eucalyptus grandis
Eucgr.F02952 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41719040-41729039 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067286 5270 Rosid View MSA
123739285 5271 Pentapetalae View MSA
122788186 5272 Eudicot View MSA
122043013 5273 Angiosperm View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.7648 0.0 80.4401 High High
cufflinks 3.60878 0.0 8.47668   Low
cufflinks 29.689 0.0 70.3816 High High
cufflinks 6.20654 0.0 14.4884    
cufflinks 7.83489 0.0 17.8899    
cufflinks 14.1203 0.0 31.73    

0 Strain