Gene : Eucgr.F02953 E. grandis v2.0
Defline:  (1 of 1) PTHR12677:SF5 - TVP38/TMEM64 FAMILY MEMBRANE PROTEIN YDJX Genomic Order:  2610
Name:  ? Eucgr.F02953 Secondary Identifier:  ? PAC:32053348
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02953 0.5kb upstream 0.5kb upstream 6872 true Chr06: 41720662-41727533 Eucalyptus grandis
Eucgr.F02953 0.5kb upstream 0.5kb upstream 500 false Chr06: 41720662-41721161 Eucalyptus grandis
Eucgr.F02953 0.5kb downstream 0.5kb downstream 6872 true Chr06: 41721162-41728033 Eucalyptus grandis
Eucgr.F02953 0.5kb downstream 0.5kb downstream 500 false Chr06: 41727534-41728033 Eucalyptus grandis
Eucgr.F02953 1.0kb upstream 1.0kb upstream 7372 true Chr06: 41720162-41727533 Eucalyptus grandis
Eucgr.F02953 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41720162-41721161 Eucalyptus grandis
Eucgr.F02953 1.0kb downstream 1.0kb downstream 7372 true Chr06: 41721162-41728533 Eucalyptus grandis
Eucgr.F02953 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41727534-41728533 Eucalyptus grandis
Eucgr.F02953 2.0kb upstream 2.0kb upstream 8372 true Chr06: 41719162-41727533 Eucalyptus grandis
Eucgr.F02953 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41719162-41721161 Eucalyptus grandis
Eucgr.F02953 2.0kb downstream 2.0kb downstream 8372 true Chr06: 41721162-41729533 Eucalyptus grandis
Eucgr.F02953 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41727534-41729533 Eucalyptus grandis
Eucgr.F02953 5.0kb upstream 5.0kb upstream 11372 true Chr06: 41716162-41727533 Eucalyptus grandis
Eucgr.F02953 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41716162-41721161 Eucalyptus grandis
Eucgr.F02953 5.0kb downstream 5.0kb downstream 11372 true Chr06: 41721162-41732533 Eucalyptus grandis
Eucgr.F02953 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41727534-41732533 Eucalyptus grandis
Eucgr.F02953 10.0kb upstream 10.0kb upstream 16372 true Chr06: 41711162-41727533 Eucalyptus grandis
Eucgr.F02953 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41711162-41721161 Eucalyptus grandis
Eucgr.F02953 10.0kb downstream 10.0kb downstream 16372 true Chr06: 41721162-41737533 Eucalyptus grandis
Eucgr.F02953 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41727534-41737533 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061870 5270 Rosid View MSA
123739963 5271 Pentapetalae View MSA
122789847 5272 Eudicot View MSA
122045988 5273 Angiosperm View MSA
121348100 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.072 0.0 30.1886    
cufflinks 8.37319 0.0 20.0692    
cufflinks 10.1525 0.0 23.9604    
cufflinks 3.78934 0.0 10.2538   Low
cufflinks 8.76753 0.0 20.9602    
cufflinks 24.6629 0.0 66.092   High

0 Strain