Gene : Eucgr.F02958 E. grandis v2.0
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  2615
Name:  ? Eucgr.F02958 Secondary Identifier:  ? PAC:32055125
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPAS-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02958 0.5kb upstream 0.5kb upstream 3184 true Chr06: 41777954-41781137 Eucalyptus grandis
Eucgr.F02958 0.5kb upstream 0.5kb upstream 500 false Chr06: 41780638-41781137 Eucalyptus grandis
Eucgr.F02958 0.5kb downstream 0.5kb downstream 3184 true Chr06: 41777454-41780637 Eucalyptus grandis
Eucgr.F02958 0.5kb downstream 0.5kb downstream 500 false Chr06: 41777454-41777953 Eucalyptus grandis
Eucgr.F02958 1.0kb upstream 1.0kb upstream 3684 true Chr06: 41777954-41781637 Eucalyptus grandis
Eucgr.F02958 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41780638-41781637 Eucalyptus grandis
Eucgr.F02958 1.0kb downstream 1.0kb downstream 3684 true Chr06: 41776954-41780637 Eucalyptus grandis
Eucgr.F02958 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41776954-41777953 Eucalyptus grandis
Eucgr.F02958 2.0kb upstream 2.0kb upstream 4684 true Chr06: 41777954-41782637 Eucalyptus grandis
Eucgr.F02958 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41780638-41782637 Eucalyptus grandis
Eucgr.F02958 2.0kb downstream 2.0kb downstream 4684 true Chr06: 41775954-41780637 Eucalyptus grandis
Eucgr.F02958 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41775954-41777953 Eucalyptus grandis
Eucgr.F02958 5.0kb upstream 5.0kb upstream 7684 true Chr06: 41777954-41785637 Eucalyptus grandis
Eucgr.F02958 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41780638-41785637 Eucalyptus grandis
Eucgr.F02958 5.0kb downstream 5.0kb downstream 7684 true Chr06: 41772954-41780637 Eucalyptus grandis
Eucgr.F02958 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41772954-41777953 Eucalyptus grandis
Eucgr.F02958 10.0kb upstream 10.0kb upstream 12684 true Chr06: 41777954-41790637 Eucalyptus grandis
Eucgr.F02958 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41780638-41790637 Eucalyptus grandis
Eucgr.F02958 10.0kb downstream 10.0kb downstream 12684 true Chr06: 41767954-41780637 Eucalyptus grandis
Eucgr.F02958 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41767954-41777953 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067838 5270 Rosid View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.5531 0.0 18.0982    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.898287 0.0 2.66976   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.92709 0.0 7.72847    

0 Strain