Gene : Eucgr.F02928 E. grandis v2.0
Defline:  (1 of 1) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  2585
Name:  ? Eucgr.F02928 Secondary Identifier:  ? PAC:32053069
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7409 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02928 0.5kb upstream 0.5kb upstream 8167 true Chr06: 41456957-41465123 Eucalyptus grandis
Eucgr.F02928 0.5kb upstream 0.5kb upstream 500 false Chr06: 41456957-41457456 Eucalyptus grandis
Eucgr.F02928 0.5kb downstream 0.5kb downstream 8167 true Chr06: 41457457-41465623 Eucalyptus grandis
Eucgr.F02928 0.5kb downstream 0.5kb downstream 500 false Chr06: 41465124-41465623 Eucalyptus grandis
Eucgr.F02928 1.0kb upstream 1.0kb upstream 8667 true Chr06: 41456457-41465123 Eucalyptus grandis
Eucgr.F02928 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41456457-41457456 Eucalyptus grandis
Eucgr.F02928 1.0kb downstream 1.0kb downstream 8667 true Chr06: 41457457-41466123 Eucalyptus grandis
Eucgr.F02928 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41465124-41466123 Eucalyptus grandis
Eucgr.F02928 2.0kb upstream 2.0kb upstream 9667 true Chr06: 41455457-41465123 Eucalyptus grandis
Eucgr.F02928 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41455457-41457456 Eucalyptus grandis
Eucgr.F02928 2.0kb downstream 2.0kb downstream 9667 true Chr06: 41457457-41467123 Eucalyptus grandis
Eucgr.F02928 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41465124-41467123 Eucalyptus grandis
Eucgr.F02928 5.0kb upstream 5.0kb upstream 12667 true Chr06: 41452457-41465123 Eucalyptus grandis
Eucgr.F02928 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41452457-41457456 Eucalyptus grandis
Eucgr.F02928 5.0kb downstream 5.0kb downstream 12667 true Chr06: 41457457-41470123 Eucalyptus grandis
Eucgr.F02928 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41465124-41470123 Eucalyptus grandis
Eucgr.F02928 10.0kb upstream 10.0kb upstream 17667 true Chr06: 41447457-41465123 Eucalyptus grandis
Eucgr.F02928 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41447457-41457456 Eucalyptus grandis
Eucgr.F02928 10.0kb downstream 10.0kb downstream 17667 true Chr06: 41457457-41475123 Eucalyptus grandis
Eucgr.F02928 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41465124-41475123 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067594 5270 Rosid View MSA
123739367 5271 Pentapetalae View MSA
122793263 5272 Eudicot View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.76222 0.0 7.91485    
cufflinks 4.50267 0.0 12.1048   High
cufflinks 4.02894 0.0 11.1143    
cufflinks 4.18737 0.0 13.8592    
cufflinks 2.00921 0.0 6.98334   Low
cufflinks 1.91007 0.0 6.01453   Low

0 Strain