Gene : Eucgr.F02876 E. grandis v2.0
Defline:  (1 of 2) PTHR28620:SF1 - PROTEIN F25B4.8, ISOFORM A Genomic Order:  2535
Name:  ? Eucgr.F02876 Secondary Identifier:  ? PAC:32057859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02876 0.5kb upstream 0.5kb upstream 2818 true Chr06: 40951369-40954186 Eucalyptus grandis
Eucgr.F02876 0.5kb upstream 0.5kb upstream 500 false Chr06: 40953687-40954186 Eucalyptus grandis
Eucgr.F02876 0.5kb downstream 0.5kb downstream 2818 true Chr06: 40950869-40953686 Eucalyptus grandis
Eucgr.F02876 0.5kb downstream 0.5kb downstream 500 false Chr06: 40950869-40951368 Eucalyptus grandis
Eucgr.F02876 1.0kb upstream 1.0kb upstream 3318 true Chr06: 40951369-40954686 Eucalyptus grandis
Eucgr.F02876 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40953687-40954686 Eucalyptus grandis
Eucgr.F02876 1.0kb downstream 1.0kb downstream 3318 true Chr06: 40950369-40953686 Eucalyptus grandis
Eucgr.F02876 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40950369-40951368 Eucalyptus grandis
Eucgr.F02876 2.0kb upstream 2.0kb upstream 4318 true Chr06: 40951369-40955686 Eucalyptus grandis
Eucgr.F02876 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40953687-40955686 Eucalyptus grandis
Eucgr.F02876 2.0kb downstream 2.0kb downstream 4318 true Chr06: 40949369-40953686 Eucalyptus grandis
Eucgr.F02876 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40949369-40951368 Eucalyptus grandis
Eucgr.F02876 5.0kb upstream 5.0kb upstream 7318 true Chr06: 40951369-40958686 Eucalyptus grandis
Eucgr.F02876 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40953687-40958686 Eucalyptus grandis
Eucgr.F02876 5.0kb downstream 5.0kb downstream 7318 true Chr06: 40946369-40953686 Eucalyptus grandis
Eucgr.F02876 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40946369-40951368 Eucalyptus grandis
Eucgr.F02876 10.0kb upstream 10.0kb upstream 12318 true Chr06: 40951369-40963686 Eucalyptus grandis
Eucgr.F02876 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40953687-40963686 Eucalyptus grandis
Eucgr.F02876 10.0kb downstream 10.0kb downstream 12318 true Chr06: 40941369-40953686 Eucalyptus grandis
Eucgr.F02876 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40941369-40951368 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068266 5270 Rosid View MSA
123738048 5271 Pentapetalae View MSA
122791227 5272 Eudicot View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.57503 0.0 7.72192    
cufflinks 5.43834 0.0 14.536   High
cufflinks 1.99808 0.0 6.3105    
cufflinks 1.64632 0.0 6.10733   Low
cufflinks 3.9031 0.0 11.2683    
cufflinks 5.33687 0.0 14.6843   High

0 Strain