Gene : Eucgr.F02743 E. grandis v2.0
Defline:  (1 of 1) PTHR31155:SF3 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 6, CHLOROPLASTIC Genomic Order:  2412
Name:  ? Eucgr.F02743 Secondary Identifier:  ? PAC:32056086
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5147 Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-5366 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02743 0.5kb upstream 0.5kb upstream 2345 true Chr06: 39501140-39503484 Eucalyptus grandis
Eucgr.F02743 0.5kb upstream 0.5kb upstream 500 false Chr06: 39502985-39503484 Eucalyptus grandis
Eucgr.F02743 0.5kb downstream 0.5kb downstream 2345 true Chr06: 39500640-39502984 Eucalyptus grandis
Eucgr.F02743 0.5kb downstream 0.5kb downstream 500 false Chr06: 39500640-39501139 Eucalyptus grandis
Eucgr.F02743 1.0kb upstream 1.0kb upstream 2845 true Chr06: 39501140-39503984 Eucalyptus grandis
Eucgr.F02743 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39502985-39503984 Eucalyptus grandis
Eucgr.F02743 1.0kb downstream 1.0kb downstream 2845 true Chr06: 39500140-39502984 Eucalyptus grandis
Eucgr.F02743 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39500140-39501139 Eucalyptus grandis
Eucgr.F02743 2.0kb upstream 2.0kb upstream 3845 true Chr06: 39501140-39504984 Eucalyptus grandis
Eucgr.F02743 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39502985-39504984 Eucalyptus grandis
Eucgr.F02743 2.0kb downstream 2.0kb downstream 3845 true Chr06: 39499140-39502984 Eucalyptus grandis
Eucgr.F02743 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39499140-39501139 Eucalyptus grandis
Eucgr.F02743 5.0kb upstream 5.0kb upstream 6845 true Chr06: 39501140-39507984 Eucalyptus grandis
Eucgr.F02743 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39502985-39507984 Eucalyptus grandis
Eucgr.F02743 5.0kb downstream 5.0kb downstream 6845 true Chr06: 39496140-39502984 Eucalyptus grandis
Eucgr.F02743 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39496140-39501139 Eucalyptus grandis
Eucgr.F02743 10.0kb upstream 10.0kb upstream 11845 true Chr06: 39501140-39512984 Eucalyptus grandis
Eucgr.F02743 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39502985-39512984 Eucalyptus grandis
Eucgr.F02743 10.0kb downstream 10.0kb downstream 11845 true Chr06: 39491140-39502984 Eucalyptus grandis
Eucgr.F02743 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39491140-39501139 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026445 5273 Angiosperm View MSA
124066953 5270 Rosid View MSA
123741876 5271 Pentapetalae View MSA
122770152 5272 Eudicot View MSA
121296333 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 228.126 0.0 561.243 High  
cufflinks 226.1 0.0 548.796 High  
cufflinks 192.473 0.0 460.309 High  
cufflinks 151.224 0.0 352.693 High  
cufflinks 126.444 0.0 291.834 High  
cufflinks 27.8236 0.0 61.5647   Low

0 Strain