Gene : Eucgr.F03338 E. grandis v2.0
Defline:  (1 of 17) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  2973
Name:  ? Eucgr.F03338 Secondary Identifier:  ? PAC:32052572
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03338 0.5kb upstream 0.5kb upstream 2922 true Chr06: 44832612-44835533 Eucalyptus grandis
Eucgr.F03338 0.5kb upstream 0.5kb upstream 500 false Chr06: 44835034-44835533 Eucalyptus grandis
Eucgr.F03338 0.5kb downstream 0.5kb downstream 2922 true Chr06: 44832112-44835033 Eucalyptus grandis
Eucgr.F03338 0.5kb downstream 0.5kb downstream 500 false Chr06: 44832112-44832611 Eucalyptus grandis
Eucgr.F03338 1.0kb upstream 1.0kb upstream 3422 true Chr06: 44832612-44836033 Eucalyptus grandis
Eucgr.F03338 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44835034-44836033 Eucalyptus grandis
Eucgr.F03338 1.0kb downstream 1.0kb downstream 3422 true Chr06: 44831612-44835033 Eucalyptus grandis
Eucgr.F03338 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44831612-44832611 Eucalyptus grandis
Eucgr.F03338 2.0kb upstream 2.0kb upstream 4422 true Chr06: 44832612-44837033 Eucalyptus grandis
Eucgr.F03338 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44835034-44837033 Eucalyptus grandis
Eucgr.F03338 2.0kb downstream 2.0kb downstream 4422 true Chr06: 44830612-44835033 Eucalyptus grandis
Eucgr.F03338 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44830612-44832611 Eucalyptus grandis
Eucgr.F03338 5.0kb upstream 5.0kb upstream 7422 true Chr06: 44832612-44840033 Eucalyptus grandis
Eucgr.F03338 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44835034-44840033 Eucalyptus grandis
Eucgr.F03338 5.0kb downstream 5.0kb downstream 7422 true Chr06: 44827612-44835033 Eucalyptus grandis
Eucgr.F03338 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44827612-44832611 Eucalyptus grandis
Eucgr.F03338 10.0kb upstream 10.0kb upstream 12422 true Chr06: 44832612-44845033 Eucalyptus grandis
Eucgr.F03338 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44835034-44845033 Eucalyptus grandis
Eucgr.F03338 10.0kb downstream 10.0kb downstream 12422 true Chr06: 44822612-44835033 Eucalyptus grandis
Eucgr.F03338 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44822612-44832611 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041273 5273 Angiosperm View MSA
124066050 5270 Rosid View MSA
123742828 5271 Pentapetalae View MSA
122791764 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 94.2052 0.0 212.535 High  
cufflinks 1555.94 0.0 5247.5 High High
cufflinks 101.097 0.0 229.145 High  
cufflinks 1738.24 0.0 6025.47 High High
cufflinks 147.237 0.0 342.554 High  
cufflinks 170.199 0.0 399.177 High  

0 Strain