Gene : Eucgr.F03178 E. grandis v2.0
Defline:  (1 of 1) PTHR10044:SF107 - BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED Genomic Order:  2823
Name:  ? Eucgr.F03178 Secondary Identifier:  ? PAC:32056858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03178 0.5kb upstream 0.5kb upstream 3122 true Chr06: 43647282-43650403 Eucalyptus grandis
Eucgr.F03178 0.5kb upstream 0.5kb upstream 500 false Chr06: 43647282-43647781 Eucalyptus grandis
Eucgr.F03178 0.5kb downstream 0.5kb downstream 3122 true Chr06: 43647782-43650903 Eucalyptus grandis
Eucgr.F03178 0.5kb downstream 0.5kb downstream 500 false Chr06: 43650404-43650903 Eucalyptus grandis
Eucgr.F03178 1.0kb upstream 1.0kb upstream 3622 true Chr06: 43646782-43650403 Eucalyptus grandis
Eucgr.F03178 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43646782-43647781 Eucalyptus grandis
Eucgr.F03178 1.0kb downstream 1.0kb downstream 3622 true Chr06: 43647782-43651403 Eucalyptus grandis
Eucgr.F03178 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43650404-43651403 Eucalyptus grandis
Eucgr.F03178 2.0kb upstream 2.0kb upstream 4622 true Chr06: 43645782-43650403 Eucalyptus grandis
Eucgr.F03178 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43645782-43647781 Eucalyptus grandis
Eucgr.F03178 2.0kb downstream 2.0kb downstream 4622 true Chr06: 43647782-43652403 Eucalyptus grandis
Eucgr.F03178 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43650404-43652403 Eucalyptus grandis
Eucgr.F03178 5.0kb upstream 5.0kb upstream 7622 true Chr06: 43642782-43650403 Eucalyptus grandis
Eucgr.F03178 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43642782-43647781 Eucalyptus grandis
Eucgr.F03178 5.0kb downstream 5.0kb downstream 7622 true Chr06: 43647782-43655403 Eucalyptus grandis
Eucgr.F03178 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43650404-43655403 Eucalyptus grandis
Eucgr.F03178 10.0kb upstream 10.0kb upstream 12622 true Chr06: 43637782-43650403 Eucalyptus grandis
Eucgr.F03178 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43637782-43647781 Eucalyptus grandis
Eucgr.F03178 10.0kb downstream 10.0kb downstream 12622 true Chr06: 43647782-43660403 Eucalyptus grandis
Eucgr.F03178 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43650404-43660403 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065052 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9722 0.0 37.7341    
cufflinks 26.8319 0.0 59.3405    
cufflinks 7.27223 0.0 17.0599   Low
cufflinks 32.4444 0.0 71.7958   High
cufflinks 15.2981 0.0 34.1502    
cufflinks 17.5912 0.0 38.9845    

0 Strain