Gene : Eucgr.F03190 E. grandis v2.0
Defline:  (1 of 1) PTHR15835:SF6 - F20D23.9 PROTEIN Genomic Order:  2835
Name:  ? Eucgr.F03190 Secondary Identifier:  ? PAC:32054219
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03190 0.5kb upstream 0.5kb upstream 11029 true Chr06: 43734778-43745806 Eucalyptus grandis
Eucgr.F03190 0.5kb upstream 0.5kb upstream 500 false Chr06: 43745307-43745806 Eucalyptus grandis
Eucgr.F03190 0.5kb downstream 0.5kb downstream 11029 true Chr06: 43734278-43745306 Eucalyptus grandis
Eucgr.F03190 0.5kb downstream 0.5kb downstream 500 false Chr06: 43734278-43734777 Eucalyptus grandis
Eucgr.F03190 1.0kb upstream 1.0kb upstream 11529 true Chr06: 43734778-43746306 Eucalyptus grandis
Eucgr.F03190 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43745307-43746306 Eucalyptus grandis
Eucgr.F03190 1.0kb downstream 1.0kb downstream 11529 true Chr06: 43733778-43745306 Eucalyptus grandis
Eucgr.F03190 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43733778-43734777 Eucalyptus grandis
Eucgr.F03190 2.0kb upstream 2.0kb upstream 12529 true Chr06: 43734778-43747306 Eucalyptus grandis
Eucgr.F03190 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43745307-43747306 Eucalyptus grandis
Eucgr.F03190 2.0kb downstream 2.0kb downstream 12529 true Chr06: 43732778-43745306 Eucalyptus grandis
Eucgr.F03190 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43732778-43734777 Eucalyptus grandis
Eucgr.F03190 5.0kb upstream 5.0kb upstream 15529 true Chr06: 43734778-43750306 Eucalyptus grandis
Eucgr.F03190 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43745307-43750306 Eucalyptus grandis
Eucgr.F03190 5.0kb downstream 5.0kb downstream 15529 true Chr06: 43729778-43745306 Eucalyptus grandis
Eucgr.F03190 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43729778-43734777 Eucalyptus grandis
Eucgr.F03190 10.0kb upstream 10.0kb upstream 20529 true Chr06: 43734778-43755306 Eucalyptus grandis
Eucgr.F03190 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43745307-43755306 Eucalyptus grandis
Eucgr.F03190 10.0kb downstream 10.0kb downstream 20529 true Chr06: 43724778-43745306 Eucalyptus grandis
Eucgr.F03190 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43724778-43734777 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065302 5270 Rosid View MSA
123751244 5271 Pentapetalae View MSA
122788021 5272 Eudicot View MSA
122045588 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4531 0.0 44.8767   High
cufflinks 9.91459 0.0 22.4945    
cufflinks 16.1374 0.0 42.4131    
cufflinks 7.8709 0.0 17.7104   Low
cufflinks 8.08369 0.0 18.1489   Low
cufflinks 15.442 0.0 35.1191    

0 Strain