Gene : Eucgr.F03161 E. grandis v2.0
Defline:  (1 of 1) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  2806
Name:  ? Eucgr.F03161 Secondary Identifier:  ? PAC:32057585
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5173 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PYRUVDEHYD-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03161 0.5kb upstream 0.5kb upstream 7275 true Chr06: 43484262-43491536 Eucalyptus grandis
Eucgr.F03161 0.5kb upstream 0.5kb upstream 500 false Chr06: 43484262-43484761 Eucalyptus grandis
Eucgr.F03161 0.5kb downstream 0.5kb downstream 7275 true Chr06: 43484762-43492036 Eucalyptus grandis
Eucgr.F03161 0.5kb downstream 0.5kb downstream 500 false Chr06: 43491537-43492036 Eucalyptus grandis
Eucgr.F03161 1.0kb upstream 1.0kb upstream 7775 true Chr06: 43483762-43491536 Eucalyptus grandis
Eucgr.F03161 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43483762-43484761 Eucalyptus grandis
Eucgr.F03161 1.0kb downstream 1.0kb downstream 7775 true Chr06: 43484762-43492536 Eucalyptus grandis
Eucgr.F03161 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43491537-43492536 Eucalyptus grandis
Eucgr.F03161 2.0kb upstream 2.0kb upstream 8775 true Chr06: 43482762-43491536 Eucalyptus grandis
Eucgr.F03161 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43482762-43484761 Eucalyptus grandis
Eucgr.F03161 2.0kb downstream 2.0kb downstream 8775 true Chr06: 43484762-43493536 Eucalyptus grandis
Eucgr.F03161 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43491537-43493536 Eucalyptus grandis
Eucgr.F03161 5.0kb upstream 5.0kb upstream 11775 true Chr06: 43479762-43491536 Eucalyptus grandis
Eucgr.F03161 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43479762-43484761 Eucalyptus grandis
Eucgr.F03161 5.0kb downstream 5.0kb downstream 11775 true Chr06: 43484762-43496536 Eucalyptus grandis
Eucgr.F03161 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43491537-43496536 Eucalyptus grandis
Eucgr.F03161 10.0kb upstream 10.0kb upstream 16775 true Chr06: 43474762-43491536 Eucalyptus grandis
Eucgr.F03161 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43474762-43484761 Eucalyptus grandis
Eucgr.F03161 10.0kb downstream 10.0kb downstream 16775 true Chr06: 43484762-43501536 Eucalyptus grandis
Eucgr.F03161 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43491537-43501536 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.1764 0.0 79.8222 High  
cufflinks 30.8586 0.0 70.7444    
cufflinks 35.0136 0.0 89.0884 High  
cufflinks 40.6562 0.0 94.4897 High High
cufflinks 25.4333 0.0 57.3609   Low
cufflinks 26.2039 0.0 58.8308   Low

0 Strain