Gene : Eucgr.F03162 E. grandis v2.0
Defline:  (1 of 3) PTHR15371//PTHR15371:SF7 - TIM23 Genomic Order:  2807
Name:  ? Eucgr.F03162 Secondary Identifier:  ? PAC:32056909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03162 0.5kb upstream 0.5kb upstream 3607 true Chr06: 43492670-43496276 Eucalyptus grandis
Eucgr.F03162 0.5kb upstream 0.5kb upstream 500 false Chr06: 43495777-43496276 Eucalyptus grandis
Eucgr.F03162 0.5kb downstream 0.5kb downstream 3607 true Chr06: 43492170-43495776 Eucalyptus grandis
Eucgr.F03162 0.5kb downstream 0.5kb downstream 500 false Chr06: 43492170-43492669 Eucalyptus grandis
Eucgr.F03162 1.0kb upstream 1.0kb upstream 4107 true Chr06: 43492670-43496776 Eucalyptus grandis
Eucgr.F03162 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43495777-43496776 Eucalyptus grandis
Eucgr.F03162 1.0kb downstream 1.0kb downstream 4107 true Chr06: 43491670-43495776 Eucalyptus grandis
Eucgr.F03162 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43491670-43492669 Eucalyptus grandis
Eucgr.F03162 2.0kb upstream 2.0kb upstream 5107 true Chr06: 43492670-43497776 Eucalyptus grandis
Eucgr.F03162 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43495777-43497776 Eucalyptus grandis
Eucgr.F03162 2.0kb downstream 2.0kb downstream 5107 true Chr06: 43490670-43495776 Eucalyptus grandis
Eucgr.F03162 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43490670-43492669 Eucalyptus grandis
Eucgr.F03162 5.0kb upstream 5.0kb upstream 8107 true Chr06: 43492670-43500776 Eucalyptus grandis
Eucgr.F03162 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43495777-43500776 Eucalyptus grandis
Eucgr.F03162 5.0kb downstream 5.0kb downstream 8107 true Chr06: 43487670-43495776 Eucalyptus grandis
Eucgr.F03162 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43487670-43492669 Eucalyptus grandis
Eucgr.F03162 10.0kb upstream 10.0kb upstream 13107 true Chr06: 43492670-43505776 Eucalyptus grandis
Eucgr.F03162 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43495777-43505776 Eucalyptus grandis
Eucgr.F03162 10.0kb downstream 10.0kb downstream 13107 true Chr06: 43482670-43495776 Eucalyptus grandis
Eucgr.F03162 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43482670-43492669 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060899 5270 Rosid View MSA
123742035 5271 Pentapetalae View MSA
122795290 5272 Eudicot View MSA
122045727 5273 Angiosperm View MSA
121349022 5274 Embryophyte View MSA
123425450 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.1448 0.0 64.9901 High  
cufflinks 31.07 0.0 71.6391    
cufflinks 27.4831 0.0 64.3854 High  
cufflinks 51.3713 0.0 115.605 High High
cufflinks 28.7454 0.0 66.6408    
cufflinks 27.8267 0.0 63.9363    

0 Strain