Gene : Eucgr.F03122 E. grandis v2.0
Defline:  (1 of 4) PTHR27001:SF152 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  2769
Name:  ? Eucgr.F03122 Secondary Identifier:  ? PAC:32056718
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03122 0.5kb upstream 0.5kb upstream 5537 true Chr06: 43140243-43145779 Eucalyptus grandis
Eucgr.F03122 0.5kb upstream 0.5kb upstream 500 false Chr06: 43140243-43140742 Eucalyptus grandis
Eucgr.F03122 0.5kb downstream 0.5kb downstream 5537 true Chr06: 43140743-43146279 Eucalyptus grandis
Eucgr.F03122 0.5kb downstream 0.5kb downstream 500 false Chr06: 43145780-43146279 Eucalyptus grandis
Eucgr.F03122 1.0kb upstream 1.0kb upstream 6037 true Chr06: 43139743-43145779 Eucalyptus grandis
Eucgr.F03122 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43139743-43140742 Eucalyptus grandis
Eucgr.F03122 1.0kb downstream 1.0kb downstream 6037 true Chr06: 43140743-43146779 Eucalyptus grandis
Eucgr.F03122 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43145780-43146779 Eucalyptus grandis
Eucgr.F03122 2.0kb upstream 2.0kb upstream 7037 true Chr06: 43138743-43145779 Eucalyptus grandis
Eucgr.F03122 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43138743-43140742 Eucalyptus grandis
Eucgr.F03122 2.0kb downstream 2.0kb downstream 7037 true Chr06: 43140743-43147779 Eucalyptus grandis
Eucgr.F03122 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43145780-43147779 Eucalyptus grandis
Eucgr.F03122 5.0kb upstream 5.0kb upstream 10037 true Chr06: 43135743-43145779 Eucalyptus grandis
Eucgr.F03122 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43135743-43140742 Eucalyptus grandis
Eucgr.F03122 5.0kb downstream 5.0kb downstream 10037 true Chr06: 43140743-43150779 Eucalyptus grandis
Eucgr.F03122 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43145780-43150779 Eucalyptus grandis
Eucgr.F03122 10.0kb upstream 10.0kb upstream 15037 true Chr06: 43130743-43145779 Eucalyptus grandis
Eucgr.F03122 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43130743-43140742 Eucalyptus grandis
Eucgr.F03122 10.0kb downstream 10.0kb downstream 15037 true Chr06: 43140743-43155779 Eucalyptus grandis
Eucgr.F03122 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43145780-43155779 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066375 5270 Rosid View MSA
123738565 5271 Pentapetalae View MSA
122788767 5272 Eudicot View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.27586 0.0 20.6195   High
cufflinks 2.7491 0.0 6.58798   Low
cufflinks 6.66422 0.0 14.969    
cufflinks 5.17464 0.0 11.759    
cufflinks 5.67538 0.0 12.863    
cufflinks 4.51364 0.0 10.4334    

0 Strain