Gene : Eucgr.F03099 E. grandis v2.0
Defline:  (1 of 1) KOG3232 - Vacuolar assembly/sorting protein DID2 Genomic Order:  2751
Name:  ? Eucgr.F03099 Secondary Identifier:  ? PAC:32057050
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03099 0.5kb upstream 0.5kb upstream 2583 true Chr06: 42840476-42843058 Eucalyptus grandis
Eucgr.F03099 0.5kb upstream 0.5kb upstream 500 false Chr06: 42842559-42843058 Eucalyptus grandis
Eucgr.F03099 0.5kb downstream 0.5kb downstream 2583 true Chr06: 42839976-42842558 Eucalyptus grandis
Eucgr.F03099 0.5kb downstream 0.5kb downstream 500 false Chr06: 42839976-42840475 Eucalyptus grandis
Eucgr.F03099 1.0kb upstream 1.0kb upstream 3083 true Chr06: 42840476-42843558 Eucalyptus grandis
Eucgr.F03099 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42842559-42843558 Eucalyptus grandis
Eucgr.F03099 1.0kb downstream 1.0kb downstream 3083 true Chr06: 42839476-42842558 Eucalyptus grandis
Eucgr.F03099 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42839476-42840475 Eucalyptus grandis
Eucgr.F03099 2.0kb upstream 2.0kb upstream 4083 true Chr06: 42840476-42844558 Eucalyptus grandis
Eucgr.F03099 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42842559-42844558 Eucalyptus grandis
Eucgr.F03099 2.0kb downstream 2.0kb downstream 4083 true Chr06: 42838476-42842558 Eucalyptus grandis
Eucgr.F03099 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42838476-42840475 Eucalyptus grandis
Eucgr.F03099 5.0kb upstream 5.0kb upstream 7083 true Chr06: 42840476-42847558 Eucalyptus grandis
Eucgr.F03099 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42842559-42847558 Eucalyptus grandis
Eucgr.F03099 5.0kb downstream 5.0kb downstream 7083 true Chr06: 42835476-42842558 Eucalyptus grandis
Eucgr.F03099 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42835476-42840475 Eucalyptus grandis
Eucgr.F03099 10.0kb upstream 10.0kb upstream 12083 true Chr06: 42840476-42852558 Eucalyptus grandis
Eucgr.F03099 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42842559-42852558 Eucalyptus grandis
Eucgr.F03099 10.0kb downstream 10.0kb downstream 12083 true Chr06: 42830476-42842558 Eucalyptus grandis
Eucgr.F03099 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42830476-42840475 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 166.954 0.0 393.348 High  
cufflinks 247.771 0.0 611.449 High  
cufflinks 185.913 0.0 445.358 High  
cufflinks 201.945 0.0 484.547 High  
cufflinks 439.634 0.0 1231.05 High High
cufflinks 65.0635 0.0 151.713 High Low

0 Strain