Gene : Eucgr.F03708 E. grandis v2.0
Defline:  (1 of 1) PTHR13675:SF0 - LYR MOTIF-CONTAINING PROTEIN 2 Genomic Order:  3303
Name:  ? Eucgr.F03708 Secondary Identifier:  ? PAC:32053898
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03708 0.5kb upstream 0.5kb upstream 2680 true Chr06: 47820309-47822988 Eucalyptus grandis
Eucgr.F03708 0.5kb upstream 0.5kb upstream 500 false Chr06: 47820309-47820808 Eucalyptus grandis
Eucgr.F03708 0.5kb downstream 0.5kb downstream 2680 true Chr06: 47820809-47823488 Eucalyptus grandis
Eucgr.F03708 0.5kb downstream 0.5kb downstream 500 false Chr06: 47822989-47823488 Eucalyptus grandis
Eucgr.F03708 1.0kb upstream 1.0kb upstream 3180 true Chr06: 47819809-47822988 Eucalyptus grandis
Eucgr.F03708 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47819809-47820808 Eucalyptus grandis
Eucgr.F03708 1.0kb downstream 1.0kb downstream 3180 true Chr06: 47820809-47823988 Eucalyptus grandis
Eucgr.F03708 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47822989-47823988 Eucalyptus grandis
Eucgr.F03708 2.0kb upstream 2.0kb upstream 4180 true Chr06: 47818809-47822988 Eucalyptus grandis
Eucgr.F03708 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47818809-47820808 Eucalyptus grandis
Eucgr.F03708 2.0kb downstream 2.0kb downstream 4180 true Chr06: 47820809-47824988 Eucalyptus grandis
Eucgr.F03708 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47822989-47824988 Eucalyptus grandis
Eucgr.F03708 5.0kb upstream 5.0kb upstream 7180 true Chr06: 47815809-47822988 Eucalyptus grandis
Eucgr.F03708 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47815809-47820808 Eucalyptus grandis
Eucgr.F03708 5.0kb downstream 5.0kb downstream 7180 true Chr06: 47820809-47827988 Eucalyptus grandis
Eucgr.F03708 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47822989-47827988 Eucalyptus grandis
Eucgr.F03708 10.0kb upstream 10.0kb upstream 12180 true Chr06: 47810809-47822988 Eucalyptus grandis
Eucgr.F03708 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47810809-47820808 Eucalyptus grandis
Eucgr.F03708 10.0kb downstream 10.0kb downstream 12180 true Chr06: 47820809-47832988 Eucalyptus grandis
Eucgr.F03708 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47822989-47832988 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028538 5273 Angiosperm View MSA
124050217 5270 Rosid View MSA
123749914 5271 Pentapetalae View MSA
122789419 5272 Eudicot View MSA
121346183 5274 Embryophyte View MSA
123425474 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.45315 0.0 17.8738    
cufflinks 9.30942 0.0 24.0854   High
cufflinks 5.84478 0.0 16.2595    
cufflinks 3.85015 0.0 11.2047   Low
cufflinks 8.83881 0.0 23.2305    
cufflinks 3.48471 0.0 10.975   Low

0 Strain