Gene : Eucgr.F03712 E. grandis v2.0
Defline:  (1 of 1) PTHR11079:SF73 - RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTIC Genomic Order:  3307
Name:  ? Eucgr.F03712 Secondary Identifier:  ? PAC:32056574
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03712 0.5kb upstream 0.5kb upstream 3577 true Chr06: 47844854-47848430 Eucalyptus grandis
Eucgr.F03712 0.5kb upstream 0.5kb upstream 500 false Chr06: 47847931-47848430 Eucalyptus grandis
Eucgr.F03712 0.5kb downstream 0.5kb downstream 3577 true Chr06: 47844354-47847930 Eucalyptus grandis
Eucgr.F03712 0.5kb downstream 0.5kb downstream 500 false Chr06: 47844354-47844853 Eucalyptus grandis
Eucgr.F03712 1.0kb upstream 1.0kb upstream 4077 true Chr06: 47844854-47848930 Eucalyptus grandis
Eucgr.F03712 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47847931-47848930 Eucalyptus grandis
Eucgr.F03712 1.0kb downstream 1.0kb downstream 4077 true Chr06: 47843854-47847930 Eucalyptus grandis
Eucgr.F03712 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47843854-47844853 Eucalyptus grandis
Eucgr.F03712 2.0kb upstream 2.0kb upstream 5077 true Chr06: 47844854-47849930 Eucalyptus grandis
Eucgr.F03712 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47847931-47849930 Eucalyptus grandis
Eucgr.F03712 2.0kb downstream 2.0kb downstream 5077 true Chr06: 47842854-47847930 Eucalyptus grandis
Eucgr.F03712 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47842854-47844853 Eucalyptus grandis
Eucgr.F03712 5.0kb upstream 5.0kb upstream 8077 true Chr06: 47844854-47852930 Eucalyptus grandis
Eucgr.F03712 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47847931-47852930 Eucalyptus grandis
Eucgr.F03712 5.0kb downstream 5.0kb downstream 8077 true Chr06: 47839854-47847930 Eucalyptus grandis
Eucgr.F03712 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47839854-47844853 Eucalyptus grandis
Eucgr.F03712 10.0kb upstream 10.0kb upstream 13077 true Chr06: 47844854-47857930 Eucalyptus grandis
Eucgr.F03712 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47847931-47857930 Eucalyptus grandis
Eucgr.F03712 10.0kb downstream 10.0kb downstream 13077 true Chr06: 47834854-47847930 Eucalyptus grandis
Eucgr.F03712 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47834854-47844853 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067698 5270 Rosid View MSA
123740494 5271 Pentapetalae View MSA
122788913 5272 Eudicot View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.9434 0.0 14.8132    
cufflinks 6.06397 0.0 15.0838    
cufflinks 9.53897 0.0 22.7285    
cufflinks 6.17415 0.0 15.3427    
cufflinks 3.86709 0.0 10.0881   Low
cufflinks 11.5212 0.0 26.9209   High

0 Strain