Gene : Eucgr.F03682 E. grandis v2.0
Defline:  (1 of 3) KOG1692 - Putative cargo transport protein EMP24 (p24 protein family) Genomic Order:  3278
Name:  ? Eucgr.F03682 Secondary Identifier:  ? PAC:32056012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03682 0.5kb upstream 0.5kb upstream 4344 true Chr06: 47633030-47637373 Eucalyptus grandis
Eucgr.F03682 0.5kb upstream 0.5kb upstream 500 false Chr06: 47633030-47633529 Eucalyptus grandis
Eucgr.F03682 0.5kb downstream 0.5kb downstream 4344 true Chr06: 47633530-47637873 Eucalyptus grandis
Eucgr.F03682 0.5kb downstream 0.5kb downstream 500 false Chr06: 47637374-47637873 Eucalyptus grandis
Eucgr.F03682 1.0kb upstream 1.0kb upstream 4844 true Chr06: 47632530-47637373 Eucalyptus grandis
Eucgr.F03682 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47632530-47633529 Eucalyptus grandis
Eucgr.F03682 1.0kb downstream 1.0kb downstream 4844 true Chr06: 47633530-47638373 Eucalyptus grandis
Eucgr.F03682 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47637374-47638373 Eucalyptus grandis
Eucgr.F03682 2.0kb upstream 2.0kb upstream 5844 true Chr06: 47631530-47637373 Eucalyptus grandis
Eucgr.F03682 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47631530-47633529 Eucalyptus grandis
Eucgr.F03682 2.0kb downstream 2.0kb downstream 5844 true Chr06: 47633530-47639373 Eucalyptus grandis
Eucgr.F03682 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47637374-47639373 Eucalyptus grandis
Eucgr.F03682 5.0kb upstream 5.0kb upstream 8844 true Chr06: 47628530-47637373 Eucalyptus grandis
Eucgr.F03682 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47628530-47633529 Eucalyptus grandis
Eucgr.F03682 5.0kb downstream 5.0kb downstream 8844 true Chr06: 47633530-47642373 Eucalyptus grandis
Eucgr.F03682 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47637374-47642373 Eucalyptus grandis
Eucgr.F03682 10.0kb upstream 10.0kb upstream 13844 true Chr06: 47623530-47637373 Eucalyptus grandis
Eucgr.F03682 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47623530-47633529 Eucalyptus grandis
Eucgr.F03682 10.0kb downstream 10.0kb downstream 13844 true Chr06: 47633530-47647373 Eucalyptus grandis
Eucgr.F03682 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47637374-47647373 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072381 5270 Rosid View MSA
123751948 5271 Pentapetalae View MSA
122788237 5272 Eudicot View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.74 0.0 48.709    
cufflinks 18.102 0.0 40.721    
cufflinks 19.6974 0.0 44.2225    
cufflinks 18.1622 0.0 40.8429    
cufflinks 25.7571 0.0 57.3181   High
cufflinks 20.8019 0.0 46.8396    

0 Strain