Gene : Eucgr.F03678 E. grandis v2.0
Defline:  (1 of 2) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  3274
Name:  ? Eucgr.F03678 Secondary Identifier:  ? PAC:32055333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03678 0.5kb upstream 0.5kb upstream 8934 true Chr06: 47580229-47589162 Eucalyptus grandis
Eucgr.F03678 0.5kb upstream 0.5kb upstream 500 false Chr06: 47588663-47589162 Eucalyptus grandis
Eucgr.F03678 0.5kb downstream 0.5kb downstream 8934 true Chr06: 47579729-47588662 Eucalyptus grandis
Eucgr.F03678 0.5kb downstream 0.5kb downstream 500 false Chr06: 47579729-47580228 Eucalyptus grandis
Eucgr.F03678 1.0kb upstream 1.0kb upstream 9434 true Chr06: 47580229-47589662 Eucalyptus grandis
Eucgr.F03678 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47588663-47589662 Eucalyptus grandis
Eucgr.F03678 1.0kb downstream 1.0kb downstream 9434 true Chr06: 47579229-47588662 Eucalyptus grandis
Eucgr.F03678 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47579229-47580228 Eucalyptus grandis
Eucgr.F03678 2.0kb upstream 2.0kb upstream 10434 true Chr06: 47580229-47590662 Eucalyptus grandis
Eucgr.F03678 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47588663-47590662 Eucalyptus grandis
Eucgr.F03678 2.0kb downstream 2.0kb downstream 10434 true Chr06: 47578229-47588662 Eucalyptus grandis
Eucgr.F03678 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47578229-47580228 Eucalyptus grandis
Eucgr.F03678 5.0kb upstream 5.0kb upstream 13434 true Chr06: 47580229-47593662 Eucalyptus grandis
Eucgr.F03678 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47588663-47593662 Eucalyptus grandis
Eucgr.F03678 5.0kb downstream 5.0kb downstream 13434 true Chr06: 47575229-47588662 Eucalyptus grandis
Eucgr.F03678 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47575229-47580228 Eucalyptus grandis
Eucgr.F03678 10.0kb upstream 10.0kb upstream 18434 true Chr06: 47580229-47598662 Eucalyptus grandis
Eucgr.F03678 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47588663-47598662 Eucalyptus grandis
Eucgr.F03678 10.0kb downstream 10.0kb downstream 18434 true Chr06: 47570229-47588662 Eucalyptus grandis
Eucgr.F03678 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47570229-47580228 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779855 5273 Angiosperm View MSA
124069952 5270 Rosid View MSA
123744353 5271 Pentapetalae View MSA
122771039 5272 Eudicot View MSA
121051492 5274 Embryophyte View MSA
123091579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.289 0.0 34.4543    
cufflinks 16.7873 0.0 37.692    
cufflinks 16.4612 0.0 41.173    
cufflinks 25.5534 0.0 74.7577   High
cufflinks 19.539 0.0 44.137    
cufflinks 14.5079 0.0 32.5383    

0 Strain