Gene : Eucgr.F03650 E. grandis v2.0
Defline:  (1 of 3) KOG1588 - RNA-binding protein Sam68 and related KH domain proteins Genomic Order:  3249
Name:  ? Eucgr.F03650 Secondary Identifier:  ? PAC:32055968
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03650 0.5kb upstream 0.5kb upstream 6611 true Chr06: 47342642-47349252 Eucalyptus grandis
Eucgr.F03650 0.5kb upstream 0.5kb upstream 500 false Chr06: 47348753-47349252 Eucalyptus grandis
Eucgr.F03650 0.5kb downstream 0.5kb downstream 6611 true Chr06: 47342142-47348752 Eucalyptus grandis
Eucgr.F03650 0.5kb downstream 0.5kb downstream 500 false Chr06: 47342142-47342641 Eucalyptus grandis
Eucgr.F03650 1.0kb upstream 1.0kb upstream 7111 true Chr06: 47342642-47349752 Eucalyptus grandis
Eucgr.F03650 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47348753-47349752 Eucalyptus grandis
Eucgr.F03650 1.0kb downstream 1.0kb downstream 7111 true Chr06: 47341642-47348752 Eucalyptus grandis
Eucgr.F03650 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47341642-47342641 Eucalyptus grandis
Eucgr.F03650 2.0kb upstream 2.0kb upstream 8111 true Chr06: 47342642-47350752 Eucalyptus grandis
Eucgr.F03650 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47348753-47350752 Eucalyptus grandis
Eucgr.F03650 2.0kb downstream 2.0kb downstream 8111 true Chr06: 47340642-47348752 Eucalyptus grandis
Eucgr.F03650 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47340642-47342641 Eucalyptus grandis
Eucgr.F03650 5.0kb upstream 5.0kb upstream 11111 true Chr06: 47342642-47353752 Eucalyptus grandis
Eucgr.F03650 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47348753-47353752 Eucalyptus grandis
Eucgr.F03650 5.0kb downstream 5.0kb downstream 11111 true Chr06: 47337642-47348752 Eucalyptus grandis
Eucgr.F03650 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47337642-47342641 Eucalyptus grandis
Eucgr.F03650 10.0kb upstream 10.0kb upstream 16111 true Chr06: 47342642-47358752 Eucalyptus grandis
Eucgr.F03650 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47348753-47358752 Eucalyptus grandis
Eucgr.F03650 10.0kb downstream 10.0kb downstream 16111 true Chr06: 47332642-47348752 Eucalyptus grandis
Eucgr.F03650 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47332642-47342641 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061318 5270 Rosid View MSA
123738664 5271 Pentapetalae View MSA
122792934 5272 Eudicot View MSA
122044537 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.7324 0.0 61.4647   Low
cufflinks 72.79 0.0 163.732 High  
cufflinks 35.8754 0.0 79.3363 High  
cufflinks 97.2516 0.0 222.102 High High
cufflinks 43.1495 0.0 95.5335 High  
cufflinks 35.8282 0.0 79.2375 High  

0 Strain