Gene : Eucgr.F03602 E. grandis v2.0
Defline:  (1 of 3) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  3206
Name:  ? Eucgr.F03602 Secondary Identifier:  ? PAC:32056864
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03602 0.5kb upstream 0.5kb upstream 5893 true Chr06: 46966353-46972245 Eucalyptus grandis
Eucgr.F03602 0.5kb upstream 0.5kb upstream 500 false Chr06: 46971746-46972245 Eucalyptus grandis
Eucgr.F03602 0.5kb downstream 0.5kb downstream 5893 true Chr06: 46965853-46971745 Eucalyptus grandis
Eucgr.F03602 0.5kb downstream 0.5kb downstream 500 false Chr06: 46965853-46966352 Eucalyptus grandis
Eucgr.F03602 1.0kb upstream 1.0kb upstream 6393 true Chr06: 46966353-46972745 Eucalyptus grandis
Eucgr.F03602 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46971746-46972745 Eucalyptus grandis
Eucgr.F03602 1.0kb downstream 1.0kb downstream 6393 true Chr06: 46965353-46971745 Eucalyptus grandis
Eucgr.F03602 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46965353-46966352 Eucalyptus grandis
Eucgr.F03602 2.0kb upstream 2.0kb upstream 7393 true Chr06: 46966353-46973745 Eucalyptus grandis
Eucgr.F03602 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46971746-46973745 Eucalyptus grandis
Eucgr.F03602 2.0kb downstream 2.0kb downstream 7393 true Chr06: 46964353-46971745 Eucalyptus grandis
Eucgr.F03602 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46964353-46966352 Eucalyptus grandis
Eucgr.F03602 5.0kb upstream 5.0kb upstream 10393 true Chr06: 46966353-46976745 Eucalyptus grandis
Eucgr.F03602 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46971746-46976745 Eucalyptus grandis
Eucgr.F03602 5.0kb downstream 5.0kb downstream 10393 true Chr06: 46961353-46971745 Eucalyptus grandis
Eucgr.F03602 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46961353-46966352 Eucalyptus grandis
Eucgr.F03602 10.0kb upstream 10.0kb upstream 15393 true Chr06: 46966353-46981745 Eucalyptus grandis
Eucgr.F03602 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46971746-46981745 Eucalyptus grandis
Eucgr.F03602 10.0kb downstream 10.0kb downstream 15393 true Chr06: 46956353-46971745 Eucalyptus grandis
Eucgr.F03602 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46956353-46966352 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.0596 0.0 157.084 High High
cufflinks 43.9783 0.0 100.656 High  
cufflinks 65.1549 0.0 154.144 High  
cufflinks 46.3132 0.0 106.15 High  
cufflinks 59.6113 0.0 139.301 High  
cufflinks 37.1624 0.0 84.36 High Low

0 Strain