Gene : Eucgr.F03603 E. grandis v2.0
Defline:  (1 of 8) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Genomic Order:  3207
Name:  ? Eucgr.F03603 Secondary Identifier:  ? PAC:32055118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03603 0.5kb upstream 0.5kb upstream 5045 true Chr06: 46973388-46978432 Eucalyptus grandis
Eucgr.F03603 0.5kb upstream 0.5kb upstream 500 false Chr06: 46977933-46978432 Eucalyptus grandis
Eucgr.F03603 0.5kb downstream 0.5kb downstream 5045 true Chr06: 46972888-46977932 Eucalyptus grandis
Eucgr.F03603 0.5kb downstream 0.5kb downstream 500 false Chr06: 46972888-46973387 Eucalyptus grandis
Eucgr.F03603 1.0kb upstream 1.0kb upstream 5545 true Chr06: 46973388-46978932 Eucalyptus grandis
Eucgr.F03603 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46977933-46978932 Eucalyptus grandis
Eucgr.F03603 1.0kb downstream 1.0kb downstream 5545 true Chr06: 46972388-46977932 Eucalyptus grandis
Eucgr.F03603 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46972388-46973387 Eucalyptus grandis
Eucgr.F03603 2.0kb upstream 2.0kb upstream 6545 true Chr06: 46973388-46979932 Eucalyptus grandis
Eucgr.F03603 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46977933-46979932 Eucalyptus grandis
Eucgr.F03603 2.0kb downstream 2.0kb downstream 6545 true Chr06: 46971388-46977932 Eucalyptus grandis
Eucgr.F03603 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46971388-46973387 Eucalyptus grandis
Eucgr.F03603 5.0kb upstream 5.0kb upstream 9545 true Chr06: 46973388-46982932 Eucalyptus grandis
Eucgr.F03603 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46977933-46982932 Eucalyptus grandis
Eucgr.F03603 5.0kb downstream 5.0kb downstream 9545 true Chr06: 46968388-46977932 Eucalyptus grandis
Eucgr.F03603 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46968388-46973387 Eucalyptus grandis
Eucgr.F03603 10.0kb upstream 10.0kb upstream 14545 true Chr06: 46973388-46987932 Eucalyptus grandis
Eucgr.F03603 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46977933-46987932 Eucalyptus grandis
Eucgr.F03603 10.0kb downstream 10.0kb downstream 14545 true Chr06: 46963388-46977932 Eucalyptus grandis
Eucgr.F03603 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46963388-46973387 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065474 5270 Rosid View MSA
123753453 5271 Pentapetalae View MSA
122797686 5272 Eudicot View MSA
122043296 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.26614 0.0 6.14851    
cufflinks 3.75304 0.0 9.64294    
cufflinks 3.074 0.0 8.08996    
cufflinks 12.8428 0.0 29.4339   High
cufflinks 3.91809 0.0 10.0389    
cufflinks 2.04472 0.0 5.61827    

0 Strain