Gene : Eucgr.F03568 E. grandis v2.0
Defline:  (1 of 5) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  3178
Name:  ? Eucgr.F03568 Secondary Identifier:  ? PAC:32054188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03568 0.5kb upstream 0.5kb upstream 2399 true Chr06: 46656051-46658449 Eucalyptus grandis
Eucgr.F03568 0.5kb upstream 0.5kb upstream 500 false Chr06: 46656051-46656550 Eucalyptus grandis
Eucgr.F03568 0.5kb downstream 0.5kb downstream 2399 true Chr06: 46656551-46658949 Eucalyptus grandis
Eucgr.F03568 0.5kb downstream 0.5kb downstream 500 false Chr06: 46658450-46658949 Eucalyptus grandis
Eucgr.F03568 1.0kb upstream 1.0kb upstream 2899 true Chr06: 46655551-46658449 Eucalyptus grandis
Eucgr.F03568 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46655551-46656550 Eucalyptus grandis
Eucgr.F03568 1.0kb downstream 1.0kb downstream 2899 true Chr06: 46656551-46659449 Eucalyptus grandis
Eucgr.F03568 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46658450-46659449 Eucalyptus grandis
Eucgr.F03568 2.0kb upstream 2.0kb upstream 3899 true Chr06: 46654551-46658449 Eucalyptus grandis
Eucgr.F03568 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46654551-46656550 Eucalyptus grandis
Eucgr.F03568 2.0kb downstream 2.0kb downstream 3899 true Chr06: 46656551-46660449 Eucalyptus grandis
Eucgr.F03568 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46658450-46660449 Eucalyptus grandis
Eucgr.F03568 5.0kb upstream 5.0kb upstream 6899 true Chr06: 46651551-46658449 Eucalyptus grandis
Eucgr.F03568 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46651551-46656550 Eucalyptus grandis
Eucgr.F03568 5.0kb downstream 5.0kb downstream 6899 true Chr06: 46656551-46663449 Eucalyptus grandis
Eucgr.F03568 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46658450-46663449 Eucalyptus grandis
Eucgr.F03568 10.0kb upstream 10.0kb upstream 11899 true Chr06: 46646551-46658449 Eucalyptus grandis
Eucgr.F03568 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46646551-46656550 Eucalyptus grandis
Eucgr.F03568 10.0kb downstream 10.0kb downstream 11899 true Chr06: 46656551-46668449 Eucalyptus grandis
Eucgr.F03568 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46658450-46668449 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063187 5270 Rosid View MSA
123747908 5271 Pentapetalae View MSA
122796800 5272 Eudicot View MSA
122042100 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.142587 0.0 0.533171 Low Low
cufflinks 1.4825 0.0 4.19864   High
cufflinks 0.241787 0.0 0.858613 Low  
cufflinks 0.324886 0.0 1.11558 Low  
cufflinks 0.984133 0.0 2.90323    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain